RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 A6NJR5 290 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 DNAJC6O75061 913 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 LRCH4O75427 683 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 KDELR1P24390 212 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 TCF7P36402 384 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-230ENST00000552960 MYL6P60660 151 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 HIC1Q14526 733 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 GRAMD1BQ3KR37 738 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 ATG16L1Q676U5 607 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 XRRA1Q6P2D8 792 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 C16orf46Q6P387 395 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 C15orf39Q6ZRI6 1047 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-230ENST00000552960 SLC44A1Q8WWI5 657 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 NDNQ99608 321 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 CENPKQ9BS16 269 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 ZNF302Q9NR11 478 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 ZC3H7BQ9UGR2 993 aaKnown RBP12.82□□□□□ -0.36
HDAC7-230ENST00000552960 GINS2Q9Y248 185 aa12.82□□□□□ -0.36
HDAC7-230ENST00000552960 A0A0B4J269 797 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 LYPLA1O75608 230 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 TM7SF2O76062 418 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 CELF2O95319 508 aaKnown RBP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 PGM3O95394 542 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 KRT19P08727 400 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 EDNRBP24530 442 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 TBXAS1P24557 533 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 TRPC3Q13507 836 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 TRMT5Q32P41 509 aaKnown RBP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 KIAA0319LQ8IZA0 1049 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 ST13P4Q8IZP2 240 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 TFAP2BQ92481 460 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 C20orf27Q9GZN8 174 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 HAPLN2Q9GZV7 340 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 CISHQ9NSE2 258 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 CLIC5Q9NZA1 410 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 MAFGO15525 162 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 GRAP2O75791 330 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 ZMPSTE24O75844 475 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 TGDSO95455 350 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 SNRPAP09012 282 aaKnown RBP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 CCNFP41002 786 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 SNAPC2Q13487 334 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 SLC5A9Q2M3M2 681 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 TCHHL1Q5QJ38 904 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 SCYL2Q6P3W7 929 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 DENND5BQ6ZUT9 1274 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 SLC26A11Q86WA9 606 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 DRAXINQ8NBI3 349 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 ZFAND2BQ8WV99 257 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 ATP6V0A1Q93050 837 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 PDLIM7Q9NR12 457 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 CCL15-CCL14A0A0B4J2E2 113 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 IQCA1LA6NCM1 817 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 DGAT1O75907 488 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 NCF2P19878 526 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 TNFSF9P41273 254 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 RAP1GAPP47736 663 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 CDH6P55285 790 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 ACTR3P61158 418 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 ROR1Q01973 937 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 MED21Q13503 144 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 TRIP10Q15642 601 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 CCL15Q16663 113 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 HSF5Q4G112 596 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 LIN52Q52LA3 116 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 TTC39BQ5VTQ0 682 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 POLNQ7Z5Q5 900 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 NET1Q7Z628 596 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 CDR2LQ86X02 465 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-230ENST00000552960 CHSY1Q86X52 802 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 MCPH1Q8NEM0 835 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 SPATA16Q9BXB7 569 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 VCX3BQ9H321 246 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 VCX3AQ9NNX9 186 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 KCNK4Q9NYG8 393 aa12.81□□□□□ -0.36
HDAC7-230ENST00000552960 NDC80O14777 642 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 KCNN4O15554 427 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 PDE1BQ01064 536 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 KCTD2Q14681 263 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 RABGAP1LQ5R372 815 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 CES4AQ5XG92 561 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 DENND1BQ6P3S1 775 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 LRRC71Q8N4P6 559 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 TTC13Q8NBP0 860 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 TMEM174Q8WUU8 243 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 NTPCRQ9BSD7 190 aaKnown RBP12.8□□□□□ -0.36
HDAC7-230ENST00000552960 DHRS4Q9BTZ2 278 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 PIH1D1Q9NWS0 290 aaKnown RBP12.8□□□□□ -0.36
HDAC7-230ENST00000552960 NFASCO94856 1347 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 OR6B1O95007 311 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 PROCP04070 461 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 KRT7P08729 469 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 DHRS4L1P0CG22 281 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 STX3Q13277 289 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 DYNC1I2Q13409 638 aaKnown RBP12.8□□□□□ -0.36
HDAC7-230ENST00000552960 CCDC142Q17RM4 750 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 MMEL1Q495T6 779 aa12.8□□□□□ -0.36
HDAC7-230ENST00000552960 LRRC38Q5VT99 294 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms