RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 LAMA5O15230 3695 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 MYL6P60660 151 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 CYP24A1Q07973 514 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 ZNF667Q5HYK9 610 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 SLCO6A1Q86UG4 719 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 XXYLT1Q8NBI6 393 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 GLIS3Q8NEA6 775 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 RHBDD1Q8TEB9 315 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 PRCCQ92733 491 aaPredicted RBP17.86■□□□□ 0.45
VPS29-204ENST00000548259 CLIC6Q96NY7 704 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 NUP58Q9BVL2 599 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 KLF16Q9BXK1 252 aaPredicted RBP17.86■□□□□ 0.45
VPS29-204ENST00000548259 PANK2Q9BZ23 570 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 TNMDQ9H2S6 317 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 AGPAT3Q9NRZ7 376 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 KRT82Q9NSB4 513 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 USP36Q9P275 1121 aaKnown RBP17.86■□□□□ 0.45
VPS29-204ENST00000548259 ZNF510Q9Y2H8 683 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 NME7Q9Y5B8 376 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 STON1Q9Y6Q2 735 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 IGSF10Q6WRI0 2623 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 ACACAQ13085 2346 aa17.86■□□□□ 0.45
VPS29-204ENST00000548259 GCN1Q92616 2671 aaKnown RBP17.85■□□□□ 0.45
VPS29-204ENST00000548259 CILPO75339 1184 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 PLA2G4AP47712 749 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 CYP2J2P51589 502 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 AP3M2P53677 418 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 ADAMTS20P59510 1910 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 BIRC3Q13489 604 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 ZNF699Q32M78 642 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 FUT11Q495W5 492 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 DCAF12L1Q5VU92 463 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 SIPA1Q96FS4 1042 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 PCED1AQ9H1Q7 454 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 SLC6A17Q9H1V8 727 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 VRTNQ9H8Y1 702 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 CYLDQ9NQC7 956 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 CGNQ9P2M7 1197 aaKnown RBP17.85■□□□□ 0.45
VPS29-204ENST00000548259 DNMT3LQ9UJW3 386 aa17.85■□□□□ 0.45
VPS29-204ENST00000548259 UBE4BO95155 1302 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 METTL12A8MUP2 240 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 CHKAP35790 457 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 CDH8P55286 799 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 TEAD4Q15561 434 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 HLA-BQ31612 363 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 ERICH6BQ5W0A0 696 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 KLHDC10Q6PID8 442 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 SCUBE3Q8IX30 993 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 WBP2Q969T9 261 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 DNAI2Q9GZS0 605 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 XYLT2Q9H1B5 865 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 SMYD3Q9H7B4 428 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 SLC27A6Q9Y2P4 619 aa17.84■□□□□ 0.45
VPS29-204ENST00000548259 WASH3PC4AMC7 463 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 TBX18O95935 607 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 CISD3P0C7P0 127 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 FAM200BP0CF97 657 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 TPMTP51580 245 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 AFF3P51826 1226 aaKnown RBP17.83■□□□□ 0.44
VPS29-204ENST00000548259 CEBPZQ03701 1054 aaKnown RBP17.83■□□□□ 0.44
VPS29-204ENST00000548259 ARID5AQ03989 594 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 INAVAQ3KP66 663 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 ACOT1Q86TX2 421 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 TMPRSS6Q8IU80 811 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 FUKQ8N0W3 1084 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 PDILTQ8N807 584 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 PDCD7Q8N8D1 485 aaKnown RBP17.83■□□□□ 0.44
VPS29-204ENST00000548259 ZNF507Q8TCN5 953 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 BHMTQ93088 406 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 CDK5RAP1Q96SZ6 601 aaKnown RBP17.83■□□□□ 0.44
VPS29-204ENST00000548259 CUEDC2Q9H467 287 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 UPF2Q9HAU5 1272 aaKnown RBP17.83■□□□□ 0.44
VPS29-204ENST00000548259 CD93Q9NPY3 652 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 SCML2Q9UQR0 700 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 APC2O95996 2303 aa17.83■□□□□ 0.44
VPS29-204ENST00000548259 MYO18AQ92614 2054 aaKnown RBP17.83■□□□□ 0.44
VPS29-204ENST00000548259 ADAMTS9Q9P2N4 1935 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 GOLGA8CPA6NN73 597 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 E9PAM4 449 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 GREM1O60565 184 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 CYBBP04839 570 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 GRK6P43250 576 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 PSEN1P49768 467 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 MAP3K7CLP57077 242 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 ASIC1P78348 528 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 CYP4F3Q08477 520 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 EIF4HQ15056 248 aaKnown RBP17.82■□□□□ 0.44
VPS29-204ENST00000548259 FAM26FQ5R3K3 315 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 C10orf120Q5SQS8 335 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 PAQR9Q6ZVX9 377 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 SLC2A14Q8TDB8 520 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 SNX19Q92543 992 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 DCLK3Q9C098 648 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 MKRN2Q9H000 416 aaKnown RBP17.82■□□□□ 0.44
VPS29-204ENST00000548259 IL21RQ9HBE5 538 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 CSNK1G1Q9HCP0 422 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 PLK2Q9NYY3 685 aa17.82■□□□□ 0.44
VPS29-204ENST00000548259 THAP10Q9P2Z0 257 aaPredicted RBP17.82■□□□□ 0.44
VPS29-204ENST00000548259 EIF2B4Q9UI10 523 aaKnown RBP17.82■□□□□ 0.44
VPS29-204ENST00000548259 FNDC3AQ9Y2H6 1198 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms