RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 MBOAT7Q96N66 472 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 DEPDC7Q96QD5 511 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 FOXC2Q99958 501 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 HERC2P3Q9BVR0 1158 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 CRNKL1Q9BZJ0 848 aaKnown RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 TRIM8Q9BZR9 551 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 GPR88Q9GZN0 384 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 BTBD1Q9H0C5 482 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 FAM49AQ9H0Q0 323 aaPredicted RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 CDT1Q9H211 546 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 CXXC4Q9H2H0 198 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 NRDE2Q9H7Z3 1164 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 SMPD4Q9NXE4 827 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 C9orf78Q9NZ63 289 aaPredicted RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 PRR13Q9NZ81 148 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 SEPT10Q9P0V9 454 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 FBXW11Q9UKB1 542 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 CCPG1Q9ULG6 757 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 NOC2LQ9Y3T9 749 aaKnown RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 PDCD11Q14690 1871 aaKnown RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 VWA8A3KMH1 1905 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 COL4A2P08572 1712 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 E2F8A0AVK6 867 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 MBLAC1A4D2B0 266 aaPredicted RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 RRN3P2A6NIE6 340 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 EFCAB7A8K855 629 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 CDRT15L2A8MXV6 281 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 TMEM232C9JQI7 657 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 EYA2O00167 538 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 GRM8O00222 908 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 ELL2O00472 640 aaPredicted RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 LAD1O00515 517 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 CYR61O00622 381 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 BCAT2O15382 392 aaPredicted RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 PRPF3O43395 683 aaKnown RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 TSPAN3O60637 253 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 IGSF3O75054 1194 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 NDUFS2O75306 463 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 ZNF217O75362 1048 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 GGPS1O95749 300 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 TGFB3P10600 412 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 VAV1P15498 845 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 LPOP22079 712 aaPredicted RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 ST13P50502 369 aaKnown RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 CCT8P50990 548 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 GALK1P51570 392 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 STAT2P52630 851 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 HMGA2P52926 109 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 EPHB3P54753 998 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 RIPK4P57078 832 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 RPS6P62753 249 aaKnown RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 DEFA6Q01524 100 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 PPFIA1Q13136 1202 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 SRSF6Q13247 344 aaKnown RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 ART3Q13508 389 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 SURF1Q15526 300 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 ZRSR2Q15696 482 aaKnown RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 SLC5A9Q2M3M2 681 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 ZRANB3Q5FWF4 1079 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 CYP4A22Q5TCH4 519 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 CPZQ66K79 652 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 KRTAP5-3Q6L8H2 238 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 HMBOX1Q6NT76 420 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 GLB1LQ6UWU2 654 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 CYP2R1Q6VVX0 501 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 TAS1R1Q7RTX1 841 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 ZGRF1Q86YA3 2104 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 NAT16Q8N8M0 369 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 ENAHQ8N8S7 591 aaPredicted RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 SLC7A14Q8TBB6 771 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 NSUN6Q8TEA1 469 aaKnown RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 STAG1Q8WVM7 1258 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 DNAAF4Q8WXU2 420 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 DNASE2BQ8WZ79 361 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 TNPO1Q92973 898 aaKnown RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 KISS1RQ969F8 398 aaPredicted RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 IGSF8Q969P0 613 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 GRAMD1AQ96CP6 724 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 RBMXL1Q96E39 390 aaKnown RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 ZSWIM3Q96MP5 696 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 CATSPER2Q96P56 530 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 FAM193BQ96PV7 902 aaPredicted RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 IWS1Q96ST2 819 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 TMEM175Q9BSA9 504 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 GBP3Q9H0R5 595 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 MCCC2Q9HCC0 563 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 FBRSL1Q9HCM7 1045 aaKnown RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 THG1LQ9NWX6 298 aaKnown RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 SNTG2Q9NY99 539 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 ARMCX1Q9P291 453 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 COPG2Q9UBF2 871 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 KLHL3Q9UH77 587 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 NUDT5Q9UKK9 219 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 TPCN1Q9ULQ1 816 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 ISY1Q9ULR0 285 aaKnown RBP2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 MMP17Q9ULZ9 603 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 GINS2Q9Y248 185 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 NFE2L3Q9Y4A8 694 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 PCDHGA8Q9Y5G5 932 aa2.46□□□□□ -2.02
TRAV1-1-201ENST00000542354 KLF2Q9Y5W3 355 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms