RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 SNRNP27Q8WVK2 155 aaKnown RBP18.55■□□□□ 0.56
PVT1-220ENST00000524165 PCED1BQ96HM7 432 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 CNDP2Q96KP4 475 aaKnown RBP18.55■□□□□ 0.56
PVT1-220ENST00000524165 IL17BQ9UHF5 180 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.55■□□□□ 0.56
PVT1-220ENST00000524165 TISP43B9A030 160 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 LAD1O00515 517 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 TRAK2O60296 914 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 PRPHP41219 470 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 TUBP50607 506 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 IL9RQ01113 521 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 GUCY1B3Q02153 619 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 DNAJC3Q13217 504 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 ZRSR1Q15695 479 aaKnown RBP18.54■□□□□ 0.56
PVT1-220ENST00000524165 IL17AQ16552 155 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 ME3Q16798 604 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 SNX30Q5VWJ9 437 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 HTR3DQ70Z44 454 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 CSGALNACT2Q8N6G5 542 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 MYCBPAPQ8TBZ2 947 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 KBTBD7Q8WVZ9 684 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 REEP2Q9BRK0 252 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 PARVGQ9HBI0 331 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 CPNE5Q9HCH3 593 aa18.54■□□□□ 0.56
PVT1-220ENST00000524165 NOL7Q9UMY1 257 aaKnown RBP18.54■□□□□ 0.56
PVT1-220ENST00000524165 A0A1B0GTQ1 180 aa18.53■□□□□ 0.56
PVT1-220ENST00000524165 YWHAQP27348 245 aa18.53■□□□□ 0.56
PVT1-220ENST00000524165 PCBP4P57723 403 aaKnown RBP18.53■□□□□ 0.56
PVT1-220ENST00000524165 RBP5P82980 135 aa18.53■□□□□ 0.56
PVT1-220ENST00000524165 ILKQ13418 452 aa18.53■□□□□ 0.56
PVT1-220ENST00000524165 COLEC12Q5KU26 742 aa18.53■□□□□ 0.56
PVT1-220ENST00000524165 DTHD1Q6ZMT9 781 aa18.53■□□□□ 0.56
PVT1-220ENST00000524165 TSC1Q92574 1164 aa18.53■□□□□ 0.56
PVT1-220ENST00000524165 WBP2Q969T9 261 aa18.53■□□□□ 0.56
PVT1-220ENST00000524165 C6orf106Q9H6K1 298 aaPredicted RBP18.53■□□□□ 0.56
PVT1-220ENST00000524165 THAP10Q9P2Z0 257 aaPredicted RBP18.53■□□□□ 0.56
PVT1-220ENST00000524165 NXF1Q9UBU9 619 aaKnown RBP18.53■□□□□ 0.56
PVT1-220ENST00000524165 AHCTF1Q8WYP5 2266 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 MYO9AB2RTY4 2548 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 SYNCRIPO60506 623 aaKnown RBP18.52■□□□□ 0.56
PVT1-220ENST00000524165 FAM13AO94988 1023 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 RTN3O95197 1032 aaPredicted RBP18.52■□□□□ 0.56
PVT1-220ENST00000524165 ACO1P21399 889 aaKnown RBP18.52■□□□□ 0.56
PVT1-220ENST00000524165 ADSSP30520 456 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 COPAP53621 1224 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 WNT7BP56706 349 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 POSTNQ15063 836 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 KCNT1Q5JUK3 1230 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 SCARA3Q6AZY7 606 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 NUP93Q8N1F7 819 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 FBXO32Q969P5 355 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 FIZ1Q96SL8 496 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 CCSER2Q9H7U1 834 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.52■□□□□ 0.564e-7■■■■■ 57.7
PVT1-220ENST00000524165 FBXO10Q9UK96 956 aa18.52■□□□□ 0.56
PVT1-220ENST00000524165 ARID1BQ8NFD5 2236 aaPredicted RBP18.51■□□□□ 0.55
PVT1-220ENST00000524165 FLNCQ14315 2725 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 CBX4O00257 560 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 GREM1O60565 184 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 KRT19P08727 400 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 GLDCP23378 1020 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 WARSP23381 471 aaKnown RBP18.51■□□□□ 0.55
PVT1-220ENST00000524165 CD27P26842 260 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 IFRD2Q12894 506 aaPredicted RBP18.51■□□□□ 0.55
PVT1-220ENST00000524165 E2F5Q15329 346 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 LAYNQ6UX15 382 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 TPGS1Q6ZTW0 290 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 PRICKLE2Q7Z3G6 844 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 RFFLQ8WZ73 363 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 POMGNT1Q8WZA1 660 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 HIC2Q96JB3 615 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 ZNF578Q96N58 590 aaPredicted RBP18.51■□□□□ 0.55
PVT1-220ENST00000524165 SIX4Q9UIU6 781 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 SLC27A6Q9Y2P4 619 aa18.51■□□□□ 0.55
PVT1-220ENST00000524165 PDGFRBP09619 1106 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 IRF1P10914 325 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 CACNA2D1P54289 1103 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 MDH1BQ5I0G3 518 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 HS2ST1Q7LGA3 356 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 ADAT2Q7Z6V5 191 aaKnown RBP18.5■□□□□ 0.55
PVT1-220ENST00000524165 FAM124AQ86V42 546 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 GATAD2AQ86YP4 633 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 BRSK2Q8IWQ3 736 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 DCBLD1Q8N8Z6 715 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 UCMAQ8WVF2 138 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 BIRC7Q96CA5 298 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 PLIN2Q99541 437 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 ELF4Q99607 663 aaPredicted RBP18.5■□□□□ 0.55
PVT1-220ENST00000524165 TRIM9Q9C026 710 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 ELOVL4Q9GZR5 314 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 ST6GALNAC4Q9H4F1 302 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 TMEM30AQ9NV96 361 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 CHORDC1Q9UHD1 332 aaPredicted RBP18.5■□□□□ 0.55
PVT1-220ENST00000524165 CLCA2Q9UQC9 943 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 PLXNA2O75051 1894 aa18.5■□□□□ 0.55
PVT1-220ENST00000524165 VILLO15195 856 aa18.49■□□□□ 0.55
PVT1-220ENST00000524165 TSPAN3O60637 253 aa18.49■□□□□ 0.55
PVT1-220ENST00000524165 ITGAVP06756 1048 aa18.49■□□□□ 0.55
PVT1-220ENST00000524165 C7P10643 843 aa18.49■□□□□ 0.55
PVT1-220ENST00000524165 ACSL1P33121 698 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms