RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 CTDNEP1O95476 244 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 SEMA4FO95754 770 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 KRT19P08727 400 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 LMO2P25791 158 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 PPP3CCP48454 512 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 COPAP53621 1224 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 CDH8P55286 799 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 TFAMQ00059 246 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 GUCY1B3Q02153 619 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 SHBQ15464 509 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 ZSCAN23Q3MJ62 389 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 ADALQ6DHV7 355 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 FAM171BQ6P995 826 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 CCDC81Q6ZN84 652 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 HS2ST1Q7LGA3 356 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 TMEM86AQ8N2M4 240 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 DCBLD1Q8N8Z6 715 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 SAP25Q8TEE9 199 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 WASF1Q92558 559 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 FBXO32Q969P5 355 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 SLC6A18Q96N87 628 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 ARHGAP9Q9BRR9 750 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 NACA2Q9H009 215 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 ASB7Q9H672 318 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 CRTAC1Q9NQ79 661 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 MYH11P35749 1972 aa11.72□□□□□ -0.53
CTNNA1-234ENST00000522227 K7ENM7 598 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 PAPSS1O43252 624 aaPredicted RBP11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 SUV39H1O43463 412 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 DFNA5O60443 496 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 AFPP02771 609 aaKnown RBP11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 EPHX1P07099 455 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 CISD3P0C7P0 127 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 FDPSP14324 419 aaKnown RBP11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 CKMT2P17540 419 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 PRKCHP24723 683 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 GUCY2CP25092 1073 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 CD27P26842 260 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 PNPLA4P41247 253 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 LHX1P48742 406 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 CACNA2D1P54289 1103 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 TLE1Q04724 770 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 MDH1BQ5I0G3 518 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 VSTM1Q6UX27 236 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 SORCS1Q8WY21 1168 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 LHX5Q9H2C1 402 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 IKZF4Q9H2S9 585 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 ZSWIM6Q9HCJ5 1215 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 AASDHPPTQ9NRN7 309 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 HSPBP1Q9NZL4 362 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 EHD2Q9NZN4 543 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 WDR35Q9P2L0 1181 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 ADAMTS1Q9UHI8 967 aa11.71□□□□□ -0.53
CTNNA1-234ENST00000522227 TP53BP1Q12888 1972 aaPredicted RBP11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 BLACEA4D250 179 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 CDC45O75419 566 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 IGLV3-19P01714 112 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 WNT1P04628 370 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 YWHAQP27348 245 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 BCAT1P54687 386 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 NCKAP1LP55160 1127 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 WNT7BP56706 349 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 TRIM29Q14134 588 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 ZNF234Q14588 700 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 GEN1Q17RS7 908 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 SOWAHAQ2M3V2 549 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 LINC00303Q3SY05 128 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 HECTD3Q5T447 861 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 CSGALNACT2Q8N6G5 542 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 ZNF366Q8N895 744 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 SNRNP27Q8WVK2 155 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 EXTL1Q92935 676 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 PCED1BQ96HM7 432 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 DPH1Q9BZG8 443 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 BTBD1Q9H0C5 482 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 PCED1AQ9H1Q7 454 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 OSGEPQ9NPF4 335 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 PDRG1Q9NUG6 133 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 TMEM30AQ9NV96 361 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 THAP10Q9P2Z0 257 aaPredicted RBP11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 AGO2Q9UKV8 859 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 CREBBPQ92793 2442 aa11.7□□□□□ -0.54
CTNNA1-234ENST00000522227 H0YCG3 227 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 VILLO15195 856 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 TSPAN3O60637 253 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 FAM87AP0C7U9 286 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 EPHA8P29322 1005 aaPredicted RBP11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 CCR10P46092 362 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.542e-14■■■□□ 15
CTNNA1-234ENST00000522227 NOP14P78316 857 aaKnown RBP11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 ST3GAL1Q11201 340 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 KRT79Q5XKE5 535 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 FOXR1Q6PIV2 292 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 NECAB1Q8N987 351 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 C1orf127Q8N9H9 656 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 NOC3LQ8WTT2 800 aaKnown RBP11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 UCMAQ8WVF2 138 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 RFFLQ8WZ73 363 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 MMS19Q96T76 1030 aa11.69□□□□□ -0.54
CTNNA1-234ENST00000522227 TIPINQ9BVW5 301 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms