RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, human

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
OTUD4-208	ENST00000509620	SNX2	O60749	519 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	CBFA2T3	O75081	653 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	IGLV2-14	P01704	120 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	CREB1	P16220	341 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	PDIA3	P30101	505 aa	Known RBP	4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	PBX1	P40424	430 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	POU5F1B	Q06416	359 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	BIRC3	Q13489	604 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	CLCA4	Q14CN2	919 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	ELF2	Q15723	593 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	GRHL2	Q6ISB3	625 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	CCDC174	Q6PII3	467 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	ZNF354C	Q86Y25	554 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	FSTL5	Q8N475	847 aa	Predicted RBP	4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	SIRT6	Q8N6T7	355 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	BOLL	Q8N9W6	283 aa	Known RBP	4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	ABHD11	Q8NFV4	315 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	PRR11	Q96HE9	360 aa	Predicted RBP	4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	RIOX1	Q9H6W3	641 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	SH3BP4	Q9P0V3	963 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620	DGKB	Q9Y6T7	804 aa		4.88	□□□□□ -1.63
OTUD4-208	ENST00000509620		M0R3H8	397 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	SYT5	O00445	386 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	PCDH17	O14917	1159 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	CA12	O43570	354 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	CCNT2	O60583	730 aa	Known RBP	4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	WDR47	O94967	919 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	GLP2R	O95838	553 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	DLD	P09622	509 aa	Known RBP	4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	NHLRC4	P0CG21	123 aa	Predicted RBP	4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	WT1	P19544	449 aa	Predicted RBP	4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	PAX3	P23760	479 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	DIO1	P49895	249 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	EIF4A1	P60842	406 aa	Known RBP	4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	LMAN2	Q12907	356 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	ATP1A4	Q13733	1029 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	ZACN	Q401N2	412 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	FBXO42	Q6P3S6	717 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	PTCHD4	Q6ZW05	846 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	RAB11FIP4	Q86YS3	637 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	FAM71B	Q8TC56	605 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	STYX	Q8WUJ0	223 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	WDR24	Q96S15	920 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	RMDN3	Q96TC7	470 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	UBA5	Q9GZZ9	404 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	OBP2B	Q9NPH6	170 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	STEAP1	Q9UHE8	339 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	AMFR	Q9UKV5	643 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	DTNA	Q9Y4J8	743 aa		4.87	□□□□□ -1.63
OTUD4-208	ENST00000509620	NPC1	O15118	1278 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	ZSCAN9	O15535	394 aa	Predicted RBP	4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	SUV39H1	O43463	412 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	EXOC3	O60645	756 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	ITGA5	P08648	1049 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	SRGAP2B	P0DMP2	458 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	TMEM225B	P0DP42	221 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	HSD3B1	P14060	373 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	GPD1	P21695	349 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	PROK1	P58294	105 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	GALNT1	Q10472	559 aa	Predicted RBP	4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	PTK2B	Q14289	1009 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	SPARCL1	Q14515	664 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	ACOX1	Q15067	660 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	PFKFB4	Q16877	469 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	TBC1D25	Q3MII6	688 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	STRIP1	Q5VSL9	837 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	KIRREL2	Q6UWL6	708 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	LDHAL6A	Q6ZMR3	332 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	SLC29A4	Q7RTT9	530 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	CACNA2D3	Q8IZS8	1091 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	MYCT1	Q8N699	235 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	PNISR	Q8TF01	805 aa	Known RBP	4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	ABHD5	Q8WTS1	349 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	TRAPPC12	Q8WVT3	735 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	TBC1D5	Q92609	795 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	SARAF	Q96BY9	339 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	GRAMD1A	Q96CP6	724 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	MMS19	Q96T76	1030 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	CIPC	Q9C0C6	399 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	EPS8L2	Q9H6S3	715 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	FSCN3	Q9NQT6	498 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	HELLS	Q9NRZ9	838 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	ASIC5	Q9NY37	505 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	GTF2A1L	Q9UNN4	478 aa		4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	SCAF8	Q9UPN6	1271 aa	Known RBP	4.86	□□□□□ -1.63
OTUD4-208	ENST00000509620	LGALS16	A8MUM7	142 aa		4.85	□□□□□ -1.63
OTUD4-208	ENST00000509620	DHH	O43323	396 aa		4.85	□□□□□ -1.63
OTUD4-208	ENST00000509620	TNFRSF6B	O95407	300 aa		4.85	□□□□□ -1.63
OTUD4-208	ENST00000509620	VIP	P01282	170 aa		4.85	□□□□□ -1.63
OTUD4-208	ENST00000509620	CD19	P15391	556 aa		4.85	□□□□□ -1.63
OTUD4-208	ENST00000509620	NPPB	P16860	134 aa		4.85	□□□□□ -1.63
OTUD4-208	ENST00000509620	RENBP	P51606	427 aa		4.85	□□□□□ -1.63
OTUD4-208	ENST00000509620	SUMO2	P61956	95 aa	Known RBP	4.85	□□□□□ -1.63
OTUD4-208	ENST00000509620	FOXO1	Q12778	655 aa		4.85	□□□□□ -1.63
OTUD4-208	ENST00000509620	ST3GAL2	Q16842	350 aa		4.85	□□□□□ -1.63
OTUD4-208	ENST00000509620	TRIM71	Q2Q1W2	868 aa	Known RBP	4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms