RNA–Protein interactions for RNA: ENST00000505680.1

AC004052.1-202, humanhuman

TSL 3 BASIC

Gene AC004052.1, Length 516 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004052.1-202ENST00000505680 HIP1O00291 1037 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 IKBKBO14920 756 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 MPPED1O15442 326 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 TLR2O60603 784 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 PRDM1O75626 825 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 PRKCGP05129 697 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 SLC3A2P08195 630 aaKnown RBP3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 TSPY3P0CV98 308 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 TSPY8P0CW00 308 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 FCER1AP12319 257 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 BPIP17213 487 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 GPD1P21695 349 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 GRIA3P42263 894 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 BACE1P56817 501 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 IRX3P78415 501 aaPredicted RBP3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 EXOSC10Q01780 885 aaKnown RBP3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 SP3Q02447 781 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 KIF22Q14807 665 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 MCMDC2Q4G0Z9 681 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 ATP13A4Q4VNC1 1196 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 SBK1Q52WX2 424 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 TREML2Q5T2D2 321 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 VPS53Q5VIR6 699 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 C11orf87Q6NUJ2 197 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 GIMAP6Q6P9H5 292 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 CWC27Q6UX04 472 aaKnown RBP3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 TMEM179Q6ZVK1 233 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 KCNK18Q7Z418 384 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 GRASPQ7Z6J2 395 aaPredicted RBP3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 CTU1Q7Z7A3 348 aaKnown RBP3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 ERO1AQ96HE7 468 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 RAX2Q96IS3 184 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 PNKPQ96T60 521 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 UHRF1Q96T88 793 aaPredicted RBP3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 SENP6Q9GZR1 1112 aaPredicted RBP3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 PIF1Q9H611 641 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 SH2D4AQ9H788 454 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 ZSWIM4Q9H7M6 989 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 ZNF287Q9HBT7 754 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 LANCL2Q9NS86 450 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 CPA4Q9UI42 421 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 TRIM17Q9Y577 477 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 RLFQ13129 1914 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 ZMYM6O95789 1325 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 RAD50Q92878 1312 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 ADGRA2Q96PE1 1338 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 PLIN4Q96Q06 1357 aa3.1□□□□□ -1.91
AC004052.1-202ENST00000505680 PLXNA1Q9UIW2 1896 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 MYH6P13533 1939 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 A0A087X0B3 334 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 TCRBV7S2A1N4TA0A589 114 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 TSPY2A6NKD2 308 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 VWC2LB2RUY7 222 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 C19orf81C9J6K1 198 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 WDR46O15213 610 aaKnown RBP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 AMY1AP04745 511 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 HSPD1P10809 573 aaKnown RBP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 VCAM1P19320 739 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 GATA3P23771 443 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 SLC6A4P31645 630 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 HAND2P61296 217 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 MRPS9P82933 396 aaKnown RBP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 MTM1Q13496 603 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 KLF9Q13886 244 aaPredicted RBP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 SF3A1Q15459 793 aaKnown RBP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 SRSF7Q16629 238 aaKnown RBP eCLIP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 FAM110CQ1W6H9 321 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 MUM1Q2TAK8 710 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 KAZNQ674X7 775 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 FCRLBQ6BAA4 426 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 ZNF782Q6ZMW2 699 aaPredicted RBP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 SKAP1Q86WV1 359 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 TICAM2Q86XR7 235 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 HOMER1Q86YM7 354 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 ZNF444Q8N0Y2 327 aaPredicted RBP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 AHI1Q8N157 1196 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 ANKRD13CQ8N6S4 541 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 OR2I1PQ8NGU4 316 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 SLC30A5Q8TAD4 765 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 ACER1Q8TDN7 264 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 NUP133Q8WUM0 1156 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 RUFY2Q8WXA3 655 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 CASKIN2Q8WXE0 1202 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 C12orf42Q96LP6 360 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 CCDC17Q96LX7 622 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 ZNF48Q96MX3 618 aaPredicted RBP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 PAGR1Q9BTK6 254 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 TLR10Q9BXR5 811 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 ARHGAP39Q9C0H5 1083 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 QRSL1Q9H0R6 528 aaKnown RBP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 IL25Q9H293 177 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 GSTO2Q9H4Y5 243 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 RPAP3Q9H6T3 665 aaPredicted RBP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 RBM12Q9NTZ6 932 aaKnown RBP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 FANCLQ9NW38 375 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 ISY1Q9ULR0 285 aaKnown RBP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 RUVBL1Q9Y265 456 aaKnown RBP3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 SLC45A1Q9Y2W3 748 aa3.09□□□□□ -1.91
AC004052.1-202ENST00000505680 LRRC37A2A6NM11 1700 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms