RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 TOE1Q96GM8 510 aaKnown RBP15.04■□□□□ -0
VARS-228ENST00000495010 SMOQ99835 787 aa15.04■□□□□ -0
VARS-228ENST00000495010 VRTNQ9H8Y1 702 aa15.04■□□□□ -0
VARS-228ENST00000495010 PRDM16Q9HAZ2 1276 aa15.04■□□□□ -0
VARS-228ENST00000495010 GPSM3Q9Y4H4 160 aa15.04■□□□□ -0
VARS-228ENST00000495010 AKAP13Q12802 2813 aa15.04■□□□□ -0
VARS-228ENST00000495010 PKD1L2Q7Z442 2459 aa15.04■□□□□ -0
VARS-228ENST00000495010 ZFYVE26Q68DK2 2539 aa15.03■□□□□ -0
VARS-228ENST00000495010 WASH3PC4AMC7 463 aa15.03■□□□□ -0
VARS-228ENST00000495010 SYNCRIPO60506 623 aaKnown RBP15.03■□□□□ -0
VARS-228ENST00000495010 FAM200BP0CF97 657 aa15.03■□□□□ -0
VARS-228ENST00000495010 NCAM1P13591 858 aa15.03■□□□□ -0
VARS-228ENST00000495010 SYT1P21579 422 aa15.03■□□□□ -0
VARS-228ENST00000495010 PLA2G4AP47712 749 aa15.03■□□□□ -0
VARS-228ENST00000495010 CASP4P49662 377 aa15.03■□□□□ -0
VARS-228ENST00000495010 E2F5Q15329 346 aa15.03■□□□□ -0
VARS-228ENST00000495010 CCNI2Q6ZMN8 369 aaPredicted RBP15.03■□□□□ -0
VARS-228ENST00000495010 TADA2BQ86TJ2 420 aa15.03■□□□□ -0
VARS-228ENST00000495010 PDZD3Q86UT5 571 aa15.03■□□□□ -0
VARS-228ENST00000495010 ZCCHC9Q8N567 271 aaKnown RBP15.03■□□□□ -0
VARS-228ENST00000495010 UCMAQ8WVF2 138 aa15.03■□□□□ -0
VARS-228ENST00000495010 JAKMIP2Q96AA8 810 aa15.03■□□□□ -0
VARS-228ENST00000495010 GPR174Q9BXC1 333 aa15.03■□□□□ -0
VARS-228ENST00000495010 ZSCAN16Q9H4T2 348 aaPredicted RBP15.03■□□□□ -0
VARS-228ENST00000495010 CD248Q9HCU0 757 aa15.03■□□□□ -0
VARS-228ENST00000495010 CD93Q9NPY3 652 aa15.03■□□□□ -0
VARS-228ENST00000495010 PLK2Q9NYY3 685 aa15.03■□□□□ -0
VARS-228ENST00000495010 STON1Q9Y6Q2 735 aa15.03■□□□□ -0
VARS-228ENST00000495010 NPC1O15118 1278 aa15.02■□□□□ -0
VARS-228ENST00000495010 GREM1O60565 184 aa15.02■□□□□ -0
VARS-228ENST00000495010 BEST1O76090 585 aa15.02■□□□□ -0
VARS-228ENST00000495010 CER1O95813 267 aa15.02■□□□□ -0
VARS-228ENST00000495010 CAPNS1P04632 268 aa15.02■□□□□ -0
VARS-228ENST00000495010 CISD3P0C7P0 127 aa15.02■□□□□ -0
VARS-228ENST00000495010 ACADMP11310 421 aa15.02■□□□□ -0
VARS-228ENST00000495010 ADORA2BP29275 332 aa15.02■□□□□ -0
VARS-228ENST00000495010 OXTRP30559 389 aa15.02■□□□□ -0
VARS-228ENST00000495010 PGFP49763 221 aa15.02■□□□□ -0
VARS-228ENST00000495010 NDST1P52848 882 aa15.02■□□□□ -0
VARS-228ENST00000495010 ORC1Q13415 861 aa15.02■□□□□ -0
VARS-228ENST00000495010 CUL4AQ13619 759 aa15.02■□□□□ -0
VARS-228ENST00000495010 BMT2Q1RMZ1 405 aa15.02■□□□□ -0
VARS-228ENST00000495010 SGSM1Q2NKQ1 1148 aa15.02■□□□□ -0
VARS-228ENST00000495010 COL28A1Q2UY09 1125 aa15.02■□□□□ -0
VARS-228ENST00000495010 C10orf120Q5SQS8 335 aa15.02■□□□□ -0
VARS-228ENST00000495010 IL27RAQ6UWB1 636 aa15.02■□□□□ -0
VARS-228ENST00000495010 UNC13DQ70J99 1090 aa15.02■□□□□ -0
VARS-228ENST00000495010 METTL3Q86U44 580 aaKnown RBP15.02■□□□□ -0
VARS-228ENST00000495010 ZMIZ2Q8NF64 920 aa15.02■□□□□ -0
VARS-228ENST00000495010 CADM4Q8NFZ8 388 aa15.02■□□□□ -0
VARS-228ENST00000495010 GOLGA5Q8TBA6 731 aa15.02■□□□□ -0
VARS-228ENST00000495010 C7orf25Q9BPX7 421 aa15.02■□□□□ -0
VARS-228ENST00000495010 GAREM1Q9H706 876 aa15.02■□□□□ -0
VARS-228ENST00000495010 CSNK1G1Q9HCP0 422 aa15.02■□□□□ -0
VARS-228ENST00000495010 CYLDQ9NQC7 956 aa15.02■□□□□ -0
VARS-228ENST00000495010 FAM49BQ9NUQ9 324 aa15.02■□□□□ -0
VARS-228ENST00000495010 WSB2Q9NYS7 404 aaPredicted RBP15.02■□□□□ -0
VARS-228ENST00000495010 TFIP11Q9UBB9 837 aaKnown RBP15.02■□□□□ -0
VARS-228ENST00000495010 DNMT3LQ9UJW3 386 aa15.02■□□□□ -0
VARS-228ENST00000495010 SCML2Q9UQR0 700 aa15.02■□□□□ -0
VARS-228ENST00000495010 ZNF510Q9Y2H8 683 aa15.02■□□□□ -0
VARS-228ENST00000495010 NFE2L3Q9Y4A8 694 aa15.02■□□□□ -0
VARS-228ENST00000495010 ADAMTS20P59510 1910 aa15.02□□□□□ -0.01
VARS-228ENST00000495010 ASPMQ8IZT6 3477 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 EIF4E1BA6NMX2 242 aaKnown RBP15.01□□□□□ -0.01
VARS-228ENST00000495010 SPTLC2O15270 562 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 CYP26A1O43174 497 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 RARGP13631 454 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 ACO1P21399 889 aaKnown RBP15.01□□□□□ -0.01
VARS-228ENST00000495010 MATKP42679 507 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 NASPP49321 788 aaPredicted RBP15.01□□□□□ -0.01
VARS-228ENST00000495010 ZNF132P52740 706 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 E2F4Q16254 413 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 KNOP1Q1ED39 458 aaKnown RBP15.01□□□□□ -0.01
VARS-228ENST00000495010 FUT11Q495W5 492 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 DCAF12L1Q5VU92 463 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 CNNM4Q6P4Q7 775 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 KLHDC10Q6PID8 442 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 UNC93AQ86WB7 457 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 C12orf56Q8IXR9 622 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 CRYBG2Q8N1P7 616 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 HNRNPLLQ8WVV9 542 aaKnown RBP15.01□□□□□ -0.01
VARS-228ENST00000495010 DNASE2BQ8WZ79 361 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 PRCCQ92733 491 aaPredicted RBP15.01□□□□□ -0.01
VARS-228ENST00000495010 ELMO3Q96BJ8 720 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 SIPA1Q96FS4 1042 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 DNAI2Q9GZS0 605 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 GZF1Q9H116 711 aaPredicted RBP15.01□□□□□ -0.01
VARS-228ENST00000495010 SDCBP2Q9H190 292 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 SLC39A2Q9NP94 309 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 ITM2CQ9NQX7 267 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 NUDT5Q9UKK9 219 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 PCOLCE2Q9UKZ9 415 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 PCDHA5Q9Y5H7 936 aa15.01□□□□□ -0.01
VARS-228ENST00000495010 ZZEF1O43149 2961 aa15□□□□□ -0.01
VARS-228ENST00000495010 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15□□□□□ -0.01
VARS-228ENST00000495010 A0A1W2PQH9 124 aa15□□□□□ -0.01
VARS-228ENST00000495010 LRRIQ3A6PVS8 624 aaPredicted RBP15□□□□□ -0.01
VARS-228ENST00000495010 MDM4O15151 490 aa15□□□□□ -0.01
VARS-228ENST00000495010 BCAT2O15382 392 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms