RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 CCDC170Q8IYT3 715 aa20.26■□□□□ 0.83
PCOLCE-208ENST00000487172 C3orf20Q8ND61 904 aa20.26■□□□□ 0.83
PCOLCE-208ENST00000487172 TRIM11Q96F44 468 aa20.26■□□□□ 0.83
PCOLCE-208ENST00000487172 ZFRQ96KR1 1074 aaKnown RBP20.26■□□□□ 0.83
PCOLCE-208ENST00000487172 KLF16Q9BXK1 252 aaPredicted RBP20.26■□□□□ 0.83
PCOLCE-208ENST00000487172 NACA2Q9H009 215 aa20.26■□□□□ 0.83
PCOLCE-208ENST00000487172 KCNK12Q9HB15 430 aa20.26■□□□□ 0.83
PCOLCE-208ENST00000487172 NUDT5Q9UKK9 219 aa20.26■□□□□ 0.83
PCOLCE-208ENST00000487172 NAALADL1Q9UQQ1 740 aa20.26■□□□□ 0.83
PCOLCE-208ENST00000487172 CPQQ9Y646 472 aa20.26■□□□□ 0.83
PCOLCE-208ENST00000487172 NUMBLQ9Y6R0 609 aa20.26■□□□□ 0.83
PCOLCE-208ENST00000487172 XIRP2A4UGR9 3374 aa20.26■□□□□ 0.83
PCOLCE-208ENST00000487172 HELZP42694 1942 aaKnown RBP20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 SIGLEC16A6NMB1 481 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 HEPACAM2A8MVW5 462 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 DPYSL4O14531 572 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 MYBL1P10243 752 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 NOS2P35228 1153 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 VIPR2P41587 438 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 COG7P83436 770 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 ZXDBP98169 803 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 SYPL2Q5VXT5 272 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 DDX42Q86XP3 938 aaKnown RBP eCLIP20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 DEFB106AQ8N104 65 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 GJD3Q8N144 294 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 DEPDC1BQ8WUY9 529 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 RSPRY1Q96DX4 576 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 SMG9Q9H0W8 520 aaKnown RBP20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 RRN3Q9NYV6 651 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 MARCH2Q9P0N8 246 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 CCL26Q9Y258 94 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 PRUNE2Q8WUY3 3088 aa20.25■□□□□ 0.83
PCOLCE-208ENST00000487172 FAM170AA1A519 330 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 GOLGA8SH3BPF8 625 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 GRAP2O75791 330 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 RRM1P23921 792 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 MATKP42679 507 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 EFEMP1Q12805 493 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 USP4Q13107 963 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 NNTQ13423 1086 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 ZNF77Q15935 545 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 DCAF6Q58WW2 860 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 PLEKHA7Q6IQ23 1121 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 VITQ6UXI7 678 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 BPIFB1Q8TDL5 484 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 ADAMTS19Q8TE59 1207 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 SH3RF2Q8TEC5 729 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 ANP32BQ92688 251 aaKnown RBP20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 LRRC3BQ96PB8 259 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 RPP25Q9BUL9 199 aaKnown RBP20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 PLA2G2FQ9BZM2 168 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 SMOC2Q9H3U7 446 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 RASAL2Q9UJF2 1139 aa20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 HBS1LQ9Y450 684 aaKnown RBP20.24■□□□□ 0.83
PCOLCE-208ENST00000487172 ANKRD62A6NC57 917 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 LEFTY2O00292 366 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 MDM4O15151 490 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 LCA5LO95447 670 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 KRT3P12035 628 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 PSMC3P17980 439 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 KPNA1P52294 538 aaPredicted RBP20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 FCHO2Q0JRZ9 810 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 PPP1R15BQ5SWA1 713 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 C10orf76Q5T2E6 689 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 SLC44A3Q8N4M1 653 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 DQX1Q8TE96 717 aaKnown RBP20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 RSAD2Q8WXG1 361 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 NT5C3BQ969T7 300 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 BAG1Q99933 345 aaPredicted RBP20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 KXD1Q9BQD3 176 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 DDX23Q9BUQ8 820 aaKnown RBP20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 SELENOOQ9BVL4 669 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 METTL5Q9NRN9 209 aaKnown RBP20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 GKN1Q9NS71 199 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 PARVAQ9NVD7 372 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 TMEM51Q9NW97 253 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 SFMBT1Q9UHJ3 866 aa20.23■□□□□ 0.83
PCOLCE-208ENST00000487172 MYO10Q9HD67 2058 aa20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 IGLV3-25P01717 112 aa20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 CYLC1P35663 651 aaPredicted RBP20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 RNASE9P60153 205 aaKnown RBP20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 EIF4EBP2Q13542 120 aaPredicted RBP20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 DNAJC24Q6P3W2 148 aa20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 PHLDB2Q86SQ0 1253 aa20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 DNAAF5Q86Y56 855 aa20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 MIB1Q86YT6 1006 aa20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 TMEM139Q8IV31 216 aa20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 RIN3Q8TB24 985 aa20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 SERPINB11Q96P15 392 aa20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 NPY6RQ99463 290 aa20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 SMPD4Q9NXE4 827 aa20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 CNOT8Q9UFF9 292 aaKnown RBP20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 STAP1Q9ULZ2 295 aa20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 EPN1Q9Y6I3 576 aaPredicted RBP20.22■□□□□ 0.83
PCOLCE-208ENST00000487172 SLC12A8A0AV02 714 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 E2F8A0AVK6 867 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 TRUB2O95900 331 aaKnown RBP20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 ASGR2P07307 311 aa20.21■□□□□ 0.83
PCOLCE-208ENST00000487172 FLT3P36888 993 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms