RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 SIPA1Q96FS4 1042 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 HPDLQ96IR7 371 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 ZFRQ96KR1 1074 aaKnown RBP8.11□□□□□ -1.11
PDPN-205ENST00000487038 FIZ1Q96SL8 496 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 MTMR12Q9C0I1 747 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 NRSN2Q9GZP1 204 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 SNX25Q9H3E2 840 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 ITM2CQ9NQX7 267 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 MARK1Q9P0L2 795 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 BTBD3Q9Y2F9 522 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 KIF3AQ9Y496 699 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 STON1Q9Y6Q2 735 aa8.11□□□□□ -1.11
PDPN-205ENST00000487038 TLN1Q9Y490 2541 aaKnown RBP8.11□□□□□ -1.11
PDPN-205ENST00000487038 A0A1B0GVT2 93 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 KCNJ18B7U540 433 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 PRRT4C9JH25 899 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 TRIM24O15164 1050 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 ARHGAP6O43182 974 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 EIF5BO60841 1220 aaKnown RBP8.1□□□□□ -1.11
PDPN-205ENST00000487038 RFPL3O75679 317 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 PRPF6O94906 941 aaKnown RBP8.1□□□□□ -1.11
PDPN-205ENST00000487038 IGLV3-19P01714 112 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 PDGFRBP09619 1106 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 C1SP09871 688 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 GARTP22102 1010 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 ADSSP30520 456 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 ACTN2P35609 894 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 DDIT3P35638 169 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 TNNC1P63316 161 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 CXADRP78310 365 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 RHDQ02161 417 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 ST3GAL1Q11201 340 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 SNX30Q5VWJ9 437 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 TPGS1Q6ZTW0 290 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 SYCP3Q8IZU3 236 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 OR6B3Q8NGW1 331 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 RAD54LQ92698 747 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 ACCSQ96QU6 501 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 CCSER2Q9H7U1 834 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 MRPL44Q9H9J2 332 aaKnown RBP8.1□□□□□ -1.11
PDPN-205ENST00000487038 OSGEPQ9NPF4 335 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 COMMD8Q9NX08 183 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 SEL1LQ9UBV2 794 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 HCN2Q9UL51 889 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 SNX11Q9Y5W9 270 aa8.1□□□□□ -1.11
PDPN-205ENST00000487038 WASH3PC4AMC7 463 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 ENC1O14682 589 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 KIAA0391O15091 583 aaKnown RBP8.09□□□□□ -1.11
PDPN-205ENST00000487038 PAPSS1O43252 624 aaPredicted RBP8.09□□□□□ -1.11
PDPN-205ENST00000487038 TLX3O43711 291 aaPredicted RBP8.09□□□□□ -1.11
PDPN-205ENST00000487038 TLR5O60602 858 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 TACC1O75410 805 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 GCNT3O95395 438 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 GNL1P36915 607 aaPredicted RBP8.09□□□□□ -1.11
PDPN-205ENST00000487038 CSNK1EP49674 416 aaKnown RBP8.09□□□□□ -1.11
PDPN-205ENST00000487038 SLC5A3P53794 718 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 UCNP55089 124 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 TMPRSS3P57727 454 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 BNC1Q01954 994 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 KCNC4Q03721 635 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 ARID5AQ03989 594 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 ALCAMQ13740 583 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 MCM6Q14566 821 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 RTP5Q14D33 572 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 KIF19Q2TAC6 998 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 L1TD1Q5T7N2 865 aaKnown RBP8.09□□□□□ -1.11
PDPN-205ENST00000487038 BROXQ5VW32 411 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 HTR3DQ70Z44 454 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 ZNF720Q7Z2F6 126 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 LIMS2Q7Z4I7 341 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 SFR1Q86XK3 245 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 CACUL1Q86Y37 369 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 TMPRSS6Q8IU80 811 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 GPD1LQ8N335 351 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 CXorf38Q8TB03 319 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 SKA1Q96BD8 255 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 WBP1Q96G27 269 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 TMEM176AQ96HP8 235 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 LGMNQ99538 433 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 ARID3AQ99856 593 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 ZNF518BQ9C0D4 1074 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 MKRN2Q9H000 416 aaKnown RBP8.09□□□□□ -1.11
PDPN-205ENST00000487038 PDE11AQ9HCR9 933 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 DMAP1Q9NPF5 467 aaPredicted RBP8.09□□□□□ -1.11
PDPN-205ENST00000487038 TLR8Q9NR97 1041 aaKnown RBP8.09□□□□□ -1.11
PDPN-205ENST00000487038 INTS13Q9NVM9 706 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 GMIPQ9P107 970 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 SIX4Q9UIU6 781 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 LIMCH1Q9UPQ0 1083 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 ANKRD6Q9Y2G4 727 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 COL12A1Q99715 3063 aa8.09□□□□□ -1.11
PDPN-205ENST00000487038 CYSRT1A8MQ03 144 aa8.08□□□□□ -1.12
PDPN-205ENST00000487038 A8MXQ7 604 aa8.08□□□□□ -1.12
PDPN-205ENST00000487038 YKT6O15498 198 aa8.08□□□□□ -1.12
PDPN-205ENST00000487038 PPP1R37O75864 691 aa8.08□□□□□ -1.12
PDPN-205ENST00000487038 CLSTN1O94985 981 aa8.08□□□□□ -1.12
PDPN-205ENST00000487038 LDOC1O95751 146 aaPredicted RBP8.08□□□□□ -1.12
PDPN-205ENST00000487038 FAM163BP0C2L3 166 aa8.08□□□□□ -1.12
PDPN-205ENST00000487038 GAP43P17677 238 aa8.08□□□□□ -1.12
PDPN-205ENST00000487038 PTPN1P18031 435 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms