RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 PDRG1Q9NUG6 133 aa16.16■□□□□ 0.18
U2AF1-211ENST00000486519 PLK2Q9NYY3 685 aa16.16■□□□□ 0.18
U2AF1-211ENST00000486519 CLCA2Q9UQC9 943 aa16.16■□□□□ 0.18
U2AF1-211ENST00000486519 SNX9Q9Y5X1 595 aa16.16■□□□□ 0.18
U2AF1-211ENST00000486519 UTP20O75691 2785 aaKnown RBP16.15■□□□□ 0.18
U2AF1-211ENST00000486519 C1SP09871 688 aa16.15■□□□□ 0.18
U2AF1-211ENST00000486519 OXTRP30559 389 aa16.15■□□□□ 0.18
U2AF1-211ENST00000486519 ENPP2Q13822 863 aa16.15■□□□□ 0.18
U2AF1-211ENST00000486519 VSTM1Q6UX27 236 aa16.15■□□□□ 0.18
U2AF1-211ENST00000486519 NUDT18Q6ZVK8 323 aa16.15■□□□□ 0.18
U2AF1-211ENST00000486519 COL27A1Q8IZC6 1860 aaPredicted RBP16.15■□□□□ 0.18
U2AF1-211ENST00000486519 SAP25Q8TEE9 199 aa16.15■□□□□ 0.18
U2AF1-211ENST00000486519 PRCCQ92733 491 aaPredicted RBP16.15■□□□□ 0.18
U2AF1-211ENST00000486519 CHORDC1Q9UHD1 332 aaPredicted RBP16.15■□□□□ 0.18
U2AF1-211ENST00000486519 SPTAN1Q13813 2472 aaKnown RBP16.14■□□□□ 0.18
U2AF1-211ENST00000486519 TULP1O00294 542 aaPredicted RBP16.14■□□□□ 0.17
U2AF1-211ENST00000486519 PDGFRBP09619 1106 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 DGKGP49619 791 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 SLC12A3P55017 1021 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 UCNP55089 124 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 STARD3Q14849 445 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 GEN1Q17RS7 908 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 INAVAQ3KP66 663 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 TMEM86AQ8N2M4 240 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 KCNE4Q8WWG9 221 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 SORCS1Q8WY21 1168 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 RFFLQ8WZ73 363 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 WASF1Q92558 559 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 SLC6A18Q96N87 628 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 FAM117AQ9C073 453 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 OSGEPQ9NPF4 335 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 HSPBP1Q9NZL4 362 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 THAP10Q9P2Z0 257 aaPredicted RBP16.14■□□□□ 0.17
U2AF1-211ENST00000486519 SIX4Q9UIU6 781 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 SSUH2Q9Y2M2 353 aa16.14■□□□□ 0.17
U2AF1-211ENST00000486519 HEMK1Q9Y5R4 338 aaPredicted RBP16.14■□□□□ 0.17
U2AF1-211ENST00000486519 K7ENM7 598 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 CLDN5O00501 218 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 WNT9AO14904 365 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 TSPAN3O60637 253 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 KRT38O76015 456 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 FSBPO95073 299 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 ITGAVP06756 1048 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 ANXA13P27216 316 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 PCSK1P29120 753 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 PPP3CCP48454 512 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 IRX6P78412 446 aaPredicted RBP16.13■□□□□ 0.17
U2AF1-211ENST00000486519 TFAMQ00059 246 aaKnown RBP16.13■□□□□ 0.17
U2AF1-211ENST00000486519 BNIP3Q12983 259 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 ZRSR1Q15695 479 aaKnown RBP16.13■□□□□ 0.17
U2AF1-211ENST00000486519 LINC00303Q3SY05 128 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 TTC38Q5R3I4 469 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 ADALQ6DHV7 355 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 C4orf50Q6ZRC1 276 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 NSUN7Q8NE18 718 aaKnown RBP16.13■□□□□ 0.17
U2AF1-211ENST00000486519 KCNN1Q92952 543 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 FIZ1Q96SL8 496 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 ELF4Q99607 663 aaPredicted RBP16.13■□□□□ 0.17
U2AF1-211ENST00000486519 TIPINQ9BVW5 301 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 EBF2Q9HAK2 575 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 GDAP2Q9NXN4 497 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 PTPRJQ12913 1337 aa16.13■□□□□ 0.17
U2AF1-211ENST00000486519 ANKRD17O75179 2603 aaKnown RBP16.12■□□□□ 0.17
U2AF1-211ENST00000486519 K7ENP7 123 aa16.12■□□□□ 0.17
U2AF1-211ENST00000486519 IGHV4-34P06331 123 aa16.12■□□□□ 0.17
U2AF1-211ENST00000486519 ACO1P21399 889 aaKnown RBP16.12■□□□□ 0.17
U2AF1-211ENST00000486519 PNPLA4P41247 253 aa16.12■□□□□ 0.17
U2AF1-211ENST00000486519 MDH1BQ5I0G3 518 aa16.12■□□□□ 0.17
U2AF1-211ENST00000486519 TDRD10Q5VZ19 366 aaKnown RBP16.12■□□□□ 0.17
U2AF1-211ENST00000486519 INO80CQ6PI98 192 aaPredicted RBP16.12■□□□□ 0.17
U2AF1-211ENST00000486519 ZNF574Q6ZN55 896 aaPredicted RBP16.12■□□□□ 0.17
U2AF1-211ENST00000486519 LIMS2Q7Z4I7 341 aa16.12■□□□□ 0.17
U2AF1-211ENST00000486519 SYT2Q8N9I0 419 aaPredicted RBP16.12■□□□□ 0.17
U2AF1-211ENST00000486519 SCAMP5Q8TAC9 235 aa16.12■□□□□ 0.17
U2AF1-211ENST00000486519 C8orf48Q96LL4 319 aa16.12■□□□□ 0.17
U2AF1-211ENST00000486519 ZNF578Q96N58 590 aaPredicted RBP16.12■□□□□ 0.17
U2AF1-211ENST00000486519 XPO6Q96QU8 1125 aaKnown RBP16.12■□□□□ 0.17
U2AF1-211ENST00000486519 ZNF518BQ9C0D4 1074 aa16.12■□□□□ 0.17
U2AF1-211ENST00000486519 ASCL3Q9NQ33 180 aa16.12■□□□□ 0.17
U2AF1-211ENST00000486519 MARK1Q9P0L2 795 aa16.12■□□□□ 0.17
U2AF1-211ENST00000486519 AGO2Q9UKV8 859 aaKnown RBP16.12■□□□□ 0.17
U2AF1-211ENST00000486519 A0A1W2PNU3 283 aaPredicted RBP16.11■□□□□ 0.17
U2AF1-211ENST00000486519 LAD1O00515 517 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 TBX18O95935 607 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 MT-CO3P00414 261 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 ACADMP11310 421 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 CD27P26842 260 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 LHX1P48742 406 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 GABREP78334 506 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 ORC1Q13415 861 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 UBAP2LQ14157 1087 aaKnown RBP16.11■□□□□ 0.17
U2AF1-211ENST00000486519 ZNF234Q14588 700 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 KIF26BQ2KJY2 2108 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 KANSL1Q7Z3B3 1105 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 ADAT2Q7Z6V5 191 aaKnown RBP16.11■□□□□ 0.17
U2AF1-211ENST00000486519 CSGALNACT2Q8N6G5 542 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 TOP6BLQ8N6T0 577 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 RBBP8NLQ8NC74 664 aaPredicted RBP16.11■□□□□ 0.17
U2AF1-211ENST00000486519 VCPIP1Q96JH7 1222 aa16.11■□□□□ 0.17
U2AF1-211ENST00000486519 SLITRK1Q96PX8 696 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms