RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 RASSF3Q86WH2 238 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 SCML4Q8N228 414 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 PPM1KQ8N3J5 372 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 CPXM2Q8N436 756 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 TERB1Q8NA31 727 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 TXNDC5Q8NBS9 432 aaKnown RBP7.85□□□□□ -1.15
CPNE1-226ENST00000486021 SPATA20Q8TB22 786 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 FAM84AQ96KN4 292 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 HHIPQ96QV1 700 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 PPP1R9BQ96SB3 815 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 KLF16Q9BXK1 252 aaPredicted RBP7.85□□□□□ -1.15
CPNE1-226ENST00000486021 GZF1Q9H116 711 aaPredicted RBP7.85□□□□□ -1.15
CPNE1-226ENST00000486021 SDCBP2Q9H190 292 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 ARRDC1-AS1Q9H2J1 176 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 GOLPH3LQ9H4A5 285 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 CNGB3Q9NQW8 809 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 DNAJC17Q9NVM6 304 aaKnown RBP7.85□□□□□ -1.15
CPNE1-226ENST00000486021 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.85□□□□□ -1.15
CPNE1-226ENST00000486021 MARK1Q9P0L2 795 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 RASAL2Q9UJF2 1139 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 STARD13Q9Y3M8 1113 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 HBS1LQ9Y450 684 aaKnown RBP7.85□□□□□ -1.15
CPNE1-226ENST00000486021 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.85□□□□□ -1.15
CPNE1-226ENST00000486021 USP3Q9Y6I4 520 aa7.85□□□□□ -1.15
CPNE1-226ENST00000486021 A0A1W2PQH9 124 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 OTOL1A6NHN0 477 aaPredicted RBP7.84□□□□□ -1.15
CPNE1-226ENST00000486021 IRAK2O43187 625 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 CACNG3O60359 315 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 SYNCRIPO60506 623 aaKnown RBP7.84□□□□□ -1.15
CPNE1-226ENST00000486021 TULP3O75386 442 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 BEST1O76090 585 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 CAVIN2O95810 425 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 ACADMP11310 421 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 HOXB2P14652 356 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 GNSP15586 552 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 MPLP40238 635 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 FMO5P49326 533 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 TKTL1P51854 596 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 ATXN1P54253 815 aaKnown RBP7.84□□□□□ -1.15
CPNE1-226ENST00000486021 CACNA2D1P54289 1103 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 MFAP3P55082 362 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 UBE2HP62256 183 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 GCNT1Q02742 428 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 KDSRQ06136 332 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 PDE4CQ08493 712 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 CCDC142Q17RM4 750 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 MPPE1Q53F39 396 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 NUGGCQ68CJ6 796 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 RNF43Q68DV7 783 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 ANO7Q6IWH7 933 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 TPGS1Q6ZTW0 290 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 BBS7Q8IWZ6 715 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 ZC3H3Q8IXZ2 948 aaKnown RBP7.84□□□□□ -1.15
CPNE1-226ENST00000486021 CHPFQ8IZ52 775 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 ZMIZ2Q8NF64 920 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 ENGASEQ8NFI3 743 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 DDI1Q8WTU0 396 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 KCTD13Q8WZ19 329 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 IRGQQ8WZA9 623 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 FOXJ1Q92949 421 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 HSFY1Q96LI6 401 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 NOX5Q96PH1 765 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 SLC32A1Q9H598 525 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 FBRSQ9HAH7 460 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 MARCH2Q9P0N8 246 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 SUSD2Q9UGT4 822 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 SLC12A6Q9UHW9 1150 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 TSPAN16Q9UKR8 245 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 CEP83Q9Y592 693 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 NME7Q9Y5B8 376 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 PCDHB4Q9Y5E5 795 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 CACNA1HO95180 2353 aa7.84□□□□□ -1.15
CPNE1-226ENST00000486021 TNRC6BQ9UPQ9 1833 aaKnown RBP7.83□□□□□ -1.16
CPNE1-226ENST00000486021 TCRBV21S2A2A0A5A6 115 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 SLC12A8A0AV02 714 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 BCLAF3A2AJT9 711 aaKnown RBP7.83□□□□□ -1.16
CPNE1-226ENST00000486021 CYP26A1O43174 497 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 MOCS3O95396 460 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 AFPP02771 609 aaKnown RBP7.83□□□□□ -1.16
CPNE1-226ENST00000486021 ATP5BP06576 529 aaKnown RBP7.83□□□□□ -1.16
CPNE1-226ENST00000486021 SYPP08247 313 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 HNRNPLP14866 589 aaKnown RBP eCLIP7.83□□□□□ -1.16
CPNE1-226ENST00000486021 OXTRP30559 389 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 SLC11A2P49281 568 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 DHPSP49366 369 aaPredicted RBP7.83□□□□□ -1.16
CPNE1-226ENST00000486021 RAD23BP54727 409 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 MARSP56192 900 aaKnown RBP7.83□□□□□ -1.16
CPNE1-226ENST00000486021 EFEMP1Q12805 493 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 HNRNPDQ14103 355 aaKnown RBP7.83□□□□□ -1.16
CPNE1-226ENST00000486021 CNGA2Q16280 664 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 MEA1Q16626 185 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 DUOXA1Q1HG43 343 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 GOLGA7BQ2TAP0 167 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 RAB41Q5JT25 222 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 C1orf220Q5T0J3 134 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 PMS2CLQ68D20 193 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 SCARA3Q6AZY7 606 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 PM20D1Q6GTS8 502 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 KLHL10Q6JEL2 608 aa7.83□□□□□ -1.16
CPNE1-226ENST00000486021 TMEM270Q6UE05 265 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms