RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ABCC13Q9NSE7 274 aa15.65■□□□□ 0.1
CDC42SE1-203ENST00000470278 OLA1Q9NTK5 396 aaKnown RBP15.65■□□□□ 0.1
CDC42SE1-203ENST00000470278 TDP1Q9NUW8 608 aa15.65■□□□□ 0.1
CDC42SE1-203ENST00000470278 ARHGAP20Q9P2F6 1191 aa15.65■□□□□ 0.1
CDC42SE1-203ENST00000470278 STRIP2Q9ULQ0 834 aa15.65■□□□□ 0.1
CDC42SE1-203ENST00000470278 NUMBLQ9Y6R0 609 aa15.65■□□□□ 0.1
CDC42SE1-203ENST00000470278 CEP250Q9BV73 2442 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 SSU72P8A0A1W2PR75 194 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 H0Y858 1186 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 DDX3XO00571 662 aaKnown RBP eCLIP15.64■□□□□ 0.092e-8■■□□□ 12.9
CDC42SE1-203ENST00000470278 HSF2BPO75031 334 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 ABL1P00519 1130 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 LTFP02788 710 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 GZMAP12544 262 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 SKILP12757 684 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 RARGP13631 454 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 TNFAIP3P21580 790 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 ATP5C1P36542 298 aaKnown RBP15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 ADKP55263 362 aaKnown RBP15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 C1QBPQ07021 282 aaKnown RBP15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 PTP4A2Q12974 167 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 USP4Q13107 963 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 MAPK8IP2Q13387 824 aaPredicted RBP15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 TSR1Q2NL82 804 aaKnown RBP15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 FAM183BPQ6ZVS7 135 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 MON1BQ7L1V2 547 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 XYLT1Q86Y38 959 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 ARL14EPQ8N8R7 260 aaPredicted RBP15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 TC2NQ8N9U0 490 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 DEPDC1BQ8WUY9 529 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 NDRG1Q92597 394 aaKnown RBP15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 USP13Q92995 863 aaPredicted RBP15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 PIWIL1Q96J94 861 aaKnown RBP15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 ZFRQ96KR1 1074 aaKnown RBP15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 PRRX2Q99811 253 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 RNF38Q9H0F5 515 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 SEPT11Q9NVA2 429 aaKnown RBP15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 ZNHIT6Q9NWK9 470 aaKnown RBP15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 IMPACTQ9P2X3 320 aa15.64■□□□□ 0.09
CDC42SE1-203ENST00000470278 PROB1E7EW31 1015 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 GALR2O43603 387 aaPredicted RBP15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 CALB1P05937 261 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 YWHAZP63104 245 aaKnown RBP15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 SLC6A3Q01959 620 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 FCHO2Q0JRZ9 810 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 ZNF77Q15935 545 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 EFHC1Q5JVL4 640 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 BTBD8Q5XKL5 378 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 TANGO2Q6ICL3 276 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 ACAD10Q6JQN1 1059 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 MSANTD2Q6P1R3 559 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 MMS22LQ6ZRQ5 1243 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 ARCQ7LC44 396 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 DDX42Q86XP3 938 aaKnown RBP eCLIP15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 VCPIP1Q96JH7 1222 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 SLC2A13Q96QE2 648 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 CYP2S1Q96SQ9 504 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 C11orf70Q9BRQ4 267 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 NACA2Q9H009 215 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 POPDC2Q9HBU9 364 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 WDR35Q9P2L0 1181 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 LIMD1Q9UGP4 676 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 DNMT3LQ9UJW3 386 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 CCL26Q9Y258 94 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 CACNA1IQ9P0X4 2223 aa15.63■□□□□ 0.09
CDC42SE1-203ENST00000470278 GPR179Q6PRD1 2367 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 FYNP06241 537 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 PLEKP08567 350 aaPredicted RBP15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 MBL2P11226 248 aaPredicted RBP15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 FECHP22830 423 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 VIPR2P41587 438 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 ZXDBP98169 803 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 C10orf120Q5SQS8 335 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 OR6B2Q6IFH4 312 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 VITQ6UXI7 678 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 RSRC2Q7L4I2 434 aaKnown RBP15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 ASCL5Q7RTU5 278 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 MFSD6LQ8IWD5 586 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 UBALD2Q8IYN6 164 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 FAM149B1Q96BN6 582 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 RSPRY1Q96DX4 576 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 PANX2Q96RD6 677 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 KXD1Q9BQD3 176 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 SMG9Q9H0W8 520 aaKnown RBP15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 ADAM22Q9P0K1 906 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 ADAMTS1Q9UHI8 967 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 NENFQ9UMX5 172 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 CPQQ9Y646 472 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 COL4A2P08572 1712 aa15.62■□□□□ 0.09
CDC42SE1-203ENST00000470278 HEPACAM2A8MVW5 462 aa15.61■□□□□ 0.09
CDC42SE1-203ENST00000470278 DPYSL4O14531 572 aa15.61■□□□□ 0.09
CDC42SE1-203ENST00000470278 GFRA3O60609 400 aa15.61■□□□□ 0.09
CDC42SE1-203ENST00000470278 RTN2O75298 545 aa15.61■□□□□ 0.09
CDC42SE1-203ENST00000470278 DAB1O75553 588 aa15.61■□□□□ 0.09
CDC42SE1-203ENST00000470278 TBX18O95935 607 aa15.61■□□□□ 0.09
CDC42SE1-203ENST00000470278 PSMC3P17980 439 aa15.61■□□□□ 0.09
CDC42SE1-203ENST00000470278 GOLGA8FQ08AF8 430 aa15.61■□□□□ 0.09
CDC42SE1-203ENST00000470278 GOLGA8DPQ0D2H9 430 aa15.61■□□□□ 0.09
CDC42SE1-203ENST00000470278 NNTQ13423 1086 aa15.61■□□□□ 0.09
CDC42SE1-203ENST00000470278 TDGQ13569 410 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms