RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TRMT11Q7Z4G4 463 aaKnown RBP13.98□□□□□ -0.17
CPSF4-210ENST00000469897 FBXL13Q8NEE6 735 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 BHMTQ93088 406 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 TMEM176AQ96HP8 235 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 SPACA7Q96KW9 195 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 DNAI2Q9GZS0 605 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 PNPLA8Q9NP80 782 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 CISHQ9NSE2 258 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 PLK2Q9NYY3 685 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 USP3Q9Y6I4 520 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 A0A1W2PQF6 199 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 WASH3PC4AMC7 463 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 GIPC1O14908 333 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 CETN3O15182 167 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 STC2O76061 302 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 KLKB1P03952 638 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 HMBSP08397 361 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 RALAP11233 206 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 HOXB2P14652 356 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 PRCPP42785 496 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 RAD23BP54727 409 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 PNOCQ13519 176 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 EDRF1Q3B7T1 1238 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 DAB2IPQ5VWQ8 1189 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 PSAPL1Q6NUJ1 521 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 KLHDC10Q6PID8 442 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 CCDC186Q7Z3E2 898 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 CHPFQ8IZ52 775 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 SLC4A11Q8NBS3 891 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 P2RY11Q96G91 374 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 TMEM9BQ9NQ34 198 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 MARK1Q9P0L2 795 aa13.97□□□□□ -0.17
CPSF4-210ENST00000469897 CACNG3O60359 315 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 PMLP29590 882 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 DGKGP49619 791 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 PSEN1P49768 467 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 MXI1P50539 228 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 EFEMP1Q12805 493 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 UAP1L1Q3KQV9 507 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 TRIM61Q5EBN2 209 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 TCERG1LQ5VWI1 586 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 ANKRD40Q6AI12 368 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 KIAA1211LQ6NV74 962 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 Q6ZNB5 142 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 TADA2BQ86TJ2 420 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 SYT12Q8IV01 421 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 ZNF276Q8N554 614 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 ARID3AQ99856 593 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 UBXN6Q9BZV1 441 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 CLIC5Q9NZA1 410 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 RASAL2Q9UJF2 1139 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 ANGPTL2Q9UKU9 493 aa13.96□□□□□ -0.17
CPSF4-210ENST00000469897 OBSL1O75147 1896 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 ZBTB24O43167 697 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-210ENST00000469897 STX10O60499 249 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 EPB41P11171 864 aaKnown RBP13.95□□□□□ -0.18
CPSF4-210ENST00000469897 ITPKAP23677 461 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 NOVA1P51513 510 aaKnown RBP13.95□□□□□ -0.18
CPSF4-210ENST00000469897 COG7P83436 770 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 RPL6Q02878 288 aaKnown RBP13.95□□□□□ -0.18
CPSF4-210ENST00000469897 CBWD6Q4V339 395 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 CBWD3Q5JTY5 395 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 SPDYCQ5MJ68 293 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 CBWD5Q5RIA9 395 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 SH3PXD2AQ5TCZ1 1133 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 LYSMD4Q5XG99 296 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 ARHGAP17Q68EM7 881 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 PIGZQ86VD9 579 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 FMR1NBQ8N0W7 255 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-210ENST00000469897 ANKRD52Q8NB46 1076 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 IPO4Q8TEX9 1081 aaKnown RBP13.95□□□□□ -0.18
CPSF4-210ENST00000469897 NDRG1Q92597 394 aaKnown RBP13.95□□□□□ -0.18
CPSF4-210ENST00000469897 ERCC4Q92889 916 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-210ENST00000469897 CCDC34Q96HJ3 373 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 FAXDC2Q96IV6 333 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 SLC6A17Q9H1V8 727 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 CACNA2D2Q9NY47 1150 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 CALCOCO1Q9P1Z2 691 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 FBXO10Q9UK96 956 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 RAD54BQ9Y620 910 aa13.95□□□□□ -0.18
CPSF4-210ENST00000469897 ATXN2Q99700 1313 aaKnown RBP13.94□□□□□ -0.18
CPSF4-210ENST00000469897 DENND4CQ5VZ89 1909 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 AP5Z1O43299 807 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 CHKAP35790 457 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 MAPK8P45983 427 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 TKTL1P51854 596 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 PMS1P54277 932 aaKnown RBP13.94□□□□□ -0.18
CPSF4-210ENST00000469897 YWHAGP61981 247 aaKnown RBP eCLIP13.94□□□□□ -0.18
CPSF4-210ENST00000469897 LRMPQ12912 555 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 ST3GAL2Q16842 350 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 DCAF17Q5H9S7 520 aaPredicted RBP13.94□□□□□ -0.18
CPSF4-210ENST00000469897 RAB41Q5JT25 222 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 ZNF658Q5TYW1 1059 aaPredicted RBP13.94□□□□□ -0.18
CPSF4-210ENST00000469897 DENND1CQ8IV53 801 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 TTC39CQ8N584 583 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 CDK5RAP1Q96SZ6 601 aaKnown RBP13.94□□□□□ -0.18
CPSF4-210ENST00000469897 GABRG3Q99928 467 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 NUSAP1Q9BXS6 441 aaKnown RBP13.94□□□□□ -0.18
CPSF4-210ENST00000469897 CD248Q9HCU0 757 aa13.94□□□□□ -0.18
CPSF4-210ENST00000469897 FSCN3Q9NQT6 498 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms