RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 FLRT2O43155 660 aa18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 HOXD13P35453 343 aa18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 TPMTP51580 245 aa18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 C19orf57Q0VDD7 668 aa18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 ENPP2Q13822 863 aa18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 SF3A1Q15459 793 aaKnown RBP18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 SMAD1Q15797 465 aaKnown RBP18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 PTPRNQ16849 979 aa18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 XPO6Q96QU8 1125 aaKnown RBP18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 GZF1Q9H116 711 aaPredicted RBP18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 STK17AQ9UEE5 414 aa18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 A0A1B0GVT2 93 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 CYSRT1A8MQ03 144 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 A8MXQ7 604 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 TLR5O60602 858 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 IGLV3-19P01714 112 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 ITPKBP27987 946 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 IL12RB1P42701 662 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 DGKGP49619 791 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 ALCAMQ13740 583 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 SURF1Q15526 300 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 WDR72Q3MJ13 1102 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 IL27RAQ6UWB1 636 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 FAM35AQ86V20 835 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 GALNT15Q8N3T1 639 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 ZMIZ2Q8NF64 920 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 XYLT2Q9H1B5 865 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 OSER1Q9NX31 292 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 WDR35Q9P2L0 1181 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 EIF2B4Q9UI10 523 aaKnown RBP18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 KIF3AQ9Y496 699 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 KNTC1P50748 2209 aa18.18■□□□□ 0.5
UBE2D4-209ENST00000454428 H3BQV1 296 aa18.17■□□□□ 0.5
UBE2D4-209ENST00000454428 BEST1O76090 585 aa18.17■□□□□ 0.5
UBE2D4-209ENST00000454428 BMP15O95972 392 aa18.17■□□□□ 0.5
UBE2D4-209ENST00000454428 ACO1P21399 889 aaKnown RBP18.17■□□□□ 0.5
UBE2D4-209ENST00000454428 GJB2P29033 226 aa18.17■□□□□ 0.5
UBE2D4-209ENST00000454428 COPAP53621 1224 aa18.17■□□□□ 0.5
UBE2D4-209ENST00000454428 PDCD7Q8N8D1 485 aaKnown RBP18.17■□□□□ 0.5
UBE2D4-209ENST00000454428 PIP4K2CQ8TBX8 421 aa18.17■□□□□ 0.5
UBE2D4-209ENST00000454428 SLC39A7Q92504 469 aa18.17■□□□□ 0.5
UBE2D4-209ENST00000454428 ZNF516Q92618 1163 aa18.17■□□□□ 0.5
UBE2D4-209ENST00000454428 BHMTQ93088 406 aa18.17■□□□□ 0.5
UBE2D4-209ENST00000454428 PLK2Q9NYY3 685 aa18.17■□□□□ 0.5
UBE2D4-209ENST00000454428 HSPBP1Q9NZL4 362 aa18.17■□□□□ 0.5
UBE2D4-209ENST00000454428 TK2O00142 265 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 KIAA0391O15091 583 aaKnown RBP18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 ATXN7O15265 892 aaPredicted RBP18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 PLA2G2AP14555 144 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 IDEP14735 1019 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 ABCG1P45844 678 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 CSNK1EP49674 416 aaKnown RBP18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 TNNC1P63316 161 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 KIF19Q2TAC6 998 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 Q6ZNB5 142 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 SV2BQ7L1I2 683 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 TMPRSS6Q8IU80 811 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 FUKQ8N0W3 1084 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 DCBLD2Q96PD2 775 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 SMOQ99835 787 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 PRORYQ9H606 182 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 DMAP1Q9NPF5 467 aaPredicted RBP18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 PANK4Q9NVE7 773 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 COMMD8Q9NX08 183 aa18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 THAP10Q9P2Z0 257 aaPredicted RBP18.16■□□□□ 0.5
UBE2D4-209ENST00000454428 STAU1O95793 577 aaKnown RBP18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 DLATP10515 647 aaKnown RBP18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 CDH8P55286 799 aa18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 MYL6P60660 151 aa18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 GEN1Q17RS7 908 aa18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 RBBP8NLQ8NC74 664 aaPredicted RBP18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 HPS3Q969F9 1004 aa18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 CGRRF1Q99675 332 aa18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 NACA2Q9H009 215 aa18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 SMYD3Q9H7B4 428 aa18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 CYLDQ9NQC7 956 aa18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 NXF1Q9UBU9 619 aaKnown RBP18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 FBXO2Q9UK22 296 aaPredicted RBP18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 SLC27A6Q9Y2P4 619 aa18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 SNX11Q9Y5W9 270 aa18.15■□□□□ 0.5
UBE2D4-209ENST00000454428 TP53BP1Q12888 1972 aaPredicted RBP18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 A0A087X0B3 334 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 PLK4O00444 970 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 MDM4O15151 490 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 TNFSF14O43557 240 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 OXTRP30559 389 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 MFAP3P55082 362 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 STARD3Q14849 445 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 SNRNP35Q16560 246 aaKnown RBP18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 RRAGBQ5VZM2 374 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 DHRS13Q6UX07 377 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 GPRIN1Q7Z2K8 1008 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 ELMO3Q96BJ8 720 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 SIPA1Q96FS4 1042 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 SMARCD1Q96GM5 515 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 CLIC6Q96NY7 704 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 MED10Q9BTT4 135 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 SDCBP2Q9H190 292 aa18.14■□□□□ 0.49
UBE2D4-209ENST00000454428 KRT82Q9NSB4 513 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms