RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 ZBP1Q9H171 429 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 CALCOCO1Q9P1Z2 691 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 KRT10P13645 584 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 DNAJB2P25686 324 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 BMPR1AP36894 532 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 ARSEP51690 589 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 ATXN1P54253 815 aaKnown RBP21.05■□□□□ 0.96
VRK2-207ENST00000440705 AIF1P55008 147 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 PITX1P78337 314 aaPredicted RBP21.05■□□□□ 0.96
VRK2-207ENST00000440705 KAZNQ674X7 775 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 SND1Q7KZF4 910 aaKnown RBP eCLIP21.05■□□□□ 0.96
VRK2-207ENST00000440705 SCD5Q86SK9 330 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 C12orf50Q8NA57 414 aaPredicted RBP21.05■□□□□ 0.96
VRK2-207ENST00000440705 HERPUD2Q9BSE4 406 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 CALN1Q9BXU9 219 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 LRRC19Q9H756 370 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 RXFP1Q9HBX9 757 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 TMEM51Q9NW97 253 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 NR2E3Q9Y5X4 410 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 COL4A4P53420 1690 aaPredicted RBP21.04■□□□□ 0.96
VRK2-207ENST00000440705 MYO16Q9Y6X6 1858 aa21.04■□□□□ 0.96
VRK2-207ENST00000440705 LILRB3O75022 631 aa21.04■□□□□ 0.96
VRK2-207ENST00000440705 GBP1P32455 592 aa21.04■□□□□ 0.96
VRK2-207ENST00000440705 PSEN1P49768 467 aa21.04■□□□□ 0.96
VRK2-207ENST00000440705 FAM131BQ86XD5 332 aa21.04■□□□□ 0.96
VRK2-207ENST00000440705 GPR152Q8TDT2 470 aa21.04■□□□□ 0.96
VRK2-207ENST00000440705 MAK16Q9BXY0 300 aaKnown RBP21.04■□□□□ 0.96
VRK2-207ENST00000440705 FAM204AQ9H8W3 233 aa21.04■□□□□ 0.96
VRK2-207ENST00000440705 PIGVQ9NUD9 493 aa21.04■□□□□ 0.96
VRK2-207ENST00000440705 DDIT4Q9NX09 232 aa21.04■□□□□ 0.96
VRK2-207ENST00000440705 AP4E1Q9UPM8 1137 aa21.04■□□□□ 0.96
VRK2-207ENST00000440705 LZTS1Q9Y250 596 aa21.04■□□□□ 0.96
VRK2-207ENST00000440705 PLXNA3P51805 1871 aa21.04■□□□□ 0.96
VRK2-207ENST00000440705 SYNJ2BP-COX16A0A087WUM0 186 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 LCHNA4D1U4 455 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 ZNF487B1APH4 448 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 RAD51CO43502 376 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 CD48P09326 243 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 FNTAP49354 379 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 USP46P62068 366 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 DHX34Q14147 1143 aaKnown RBP21.03■□□□□ 0.96
VRK2-207ENST00000440705 DPYSL2Q16555 572 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 CCNG2Q16589 344 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 WDR93Q6P2C0 686 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 FAM71BQ8TC56 605 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 RNF139Q8WU17 664 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 AUTS2Q8WXX7 1259 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 ANKRD7Q92527 254 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 FBXO32Q969P5 355 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 CYP4F11Q9HBI6 524 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.03■□□□□ 0.96
VRK2-207ENST00000440705 COX16Q9P0S2 106 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 STIM2Q9P246 746 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 PCYOX1Q9UHG3 505 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 AMACRQ9UHK6 382 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 RAB21Q9UL25 225 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 FZD10Q9ULW2 581 aa21.03■□□□□ 0.96
VRK2-207ENST00000440705 A0A1W2PQH9 124 aa21.02■□□□□ 0.96
VRK2-207ENST00000440705 SLC38A8A6NNN8 435 aa21.02■□□□□ 0.96
VRK2-207ENST00000440705 ATF6P18850 670 aa21.02■□□□□ 0.96
VRK2-207ENST00000440705 ELF1P32519 619 aa21.02■□□□□ 0.96
VRK2-207ENST00000440705 CTNNB1P35222 781 aa21.02■□□□□ 0.96
VRK2-207ENST00000440705 DPYSL3Q14195 570 aa21.02■□□□□ 0.96
VRK2-207ENST00000440705 ZC3H12AQ5D1E8 599 aaKnown RBP21.02■□□□□ 0.96
VRK2-207ENST00000440705 CCDC137Q6PK04 289 aaKnown RBP21.02■□□□□ 0.96
VRK2-207ENST00000440705 CCDC185Q8N715 623 aa21.02■□□□□ 0.96
VRK2-207ENST00000440705 STKLD1Q8NE28 680 aa21.02■□□□□ 0.96
VRK2-207ENST00000440705 ADAM32Q8TC27 787 aa21.02■□□□□ 0.96
VRK2-207ENST00000440705 DQX1Q8TE96 717 aaKnown RBP21.02■□□□□ 0.96
VRK2-207ENST00000440705 PNKPQ96T60 521 aa21.02■□□□□ 0.96
VRK2-207ENST00000440705 DHX35Q9H5Z1 703 aaKnown RBP21.02■□□□□ 0.96
VRK2-207ENST00000440705 TLR8Q9NR97 1041 aaKnown RBP21.02■□□□□ 0.96
VRK2-207ENST00000440705 ARGLU1Q9NWB6 273 aaPredicted RBP21.02■□□□□ 0.96
VRK2-207ENST00000440705 GPATCH2LQ9NWQ4 482 aa21.02■□□□□ 0.96
VRK2-207ENST00000440705 GREB1Q4ZG55 1949 aa21.02■□□□□ 0.96
VRK2-207ENST00000440705 ZNF638Q14966 1978 aaKnown RBP21.02■□□□□ 0.96
VRK2-207ENST00000440705 TEX28O15482 410 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 SEC24AO95486 1093 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 L1CAMP32004 1257 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 COILP38432 576 aaPredicted RBP21.02■□□□□ 0.95
VRK2-207ENST00000440705 ALDH1A3P47895 512 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 SLC7A5Q01650 507 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 DR1Q01658 176 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 TAF10Q12962 218 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 TFDP2Q14188 446 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 ARL13BQ3SXY8 428 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 BBS12Q6ZW61 710 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 TMC7Q7Z402 723 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 TTC13Q8NBP0 860 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 GIPC2Q8TF65 315 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 HDAC7Q8WUI4 952 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 C1orf54Q8WWF1 131 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 NTAN1Q96AB6 310 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 ZNF670Q9BS34 389 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 TTLL2Q9BWV7 592 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 DCLK3Q9C098 648 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 SMOC2Q9H3U7 446 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 NMUR1Q9HB89 426 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 PCDH18Q9HCL0 1135 aa21.02■□□□□ 0.95
VRK2-207ENST00000440705 WDR6Q9NNW5 1121 aaKnown RBP21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms