RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 P4HA1P13674 534 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 PLCB3Q01970 1234 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 ZNF268Q14587 947 aaPredicted RBP16.34■□□□□ 0.21
TVP23C-203ENST00000428082 LRRC14Q15048 493 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 SV2CQ496J9 727 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 ATP13A4Q4VNC1 1196 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 CD300LGQ6UXG3 332 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 SPATA21Q7Z572 469 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 PARP9Q8IXQ6 854 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 SRRM1Q8IYB3 904 aaKnown RBP16.34■□□□□ 0.21
TVP23C-203ENST00000428082 TTC39CQ8N584 583 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 WDTC1Q8N5D0 677 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 SLC35B2Q8TB61 432 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 HASPINQ8TF76 798 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 ZNF689Q96CS4 500 aaPredicted RBP16.34■□□□□ 0.21
TVP23C-203ENST00000428082 TGS1Q96RS0 853 aaKnown RBP16.34■□□□□ 0.21
TVP23C-203ENST00000428082 FAM118BQ9BPY3 351 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 MIS12Q9H081 205 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 RC3H2Q9HBD1 1191 aaKnown RBP16.34■□□□□ 0.21
TVP23C-203ENST00000428082 KLHL11Q9NVR0 708 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 GDAP2Q9NXN4 497 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 CTNNAL1Q9UBT7 734 aa16.34■□□□□ 0.21
TVP23C-203ENST00000428082 SGK1O00141 431 aa16.33■□□□□ 0.21
TVP23C-203ENST00000428082 PRPF4O43172 522 aaKnown RBP eCLIP16.33■□□□□ 0.214e-8■■■□□ 14.7
TVP23C-203ENST00000428082 B3GAT3O94766 335 aa16.33■□□□□ 0.21
TVP23C-203ENST00000428082 CD19P15391 556 aa16.33■□□□□ 0.21
TVP23C-203ENST00000428082 OR1G1P47890 313 aa16.33■□□□□ 0.21
TVP23C-203ENST00000428082 ZNF394Q53GI3 561 aa16.33■□□□□ 0.21
TVP23C-203ENST00000428082 RNASEH2BQ5TBB1 312 aaKnown RBP16.33■□□□□ 0.21
TVP23C-203ENST00000428082 LRRC43Q8N309 656 aa16.33■□□□□ 0.21
TVP23C-203ENST00000428082 CCDC63Q8NA47 563 aa16.33■□□□□ 0.21
TVP23C-203ENST00000428082 MAML1Q92585 1016 aa16.33■□□□□ 0.21
TVP23C-203ENST00000428082 CYP3A43Q9HB55 503 aa16.33■□□□□ 0.21
TVP23C-203ENST00000428082 FGFR1OP2Q9NVK5 253 aa16.33■□□□□ 0.21
TVP23C-203ENST00000428082 CEP290O15078 2479 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 ATP2C2O75185 946 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 PECAM1P16284 738 aaPredicted RBP16.33■□□□□ 0.2
TVP23C-203ENST00000428082 TSHRP16473 764 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 PSMC1P62191 440 aaKnown RBP16.33■□□□□ 0.2
TVP23C-203ENST00000428082 OGDHQ02218 1023 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 TMED2Q15363 201 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 CCDC142Q17RM4 750 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 SOWAHAQ2M3V2 549 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 DCLRE1AQ6PJP8 1040 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 BBS12Q6ZW61 710 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 PPIL6Q8IXY8 311 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 RSPH1Q8WYR4 309 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 HERVK_113Q902F9 699 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 TFAP2BQ92481 460 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 SYNCQ9H7C4 482 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 TBK1Q9UHD2 729 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 PRG3Q9Y2Y8 225 aaPredicted RBP16.33■□□□□ 0.2
TVP23C-203ENST00000428082 NR2E3Q9Y5X4 410 aa16.33■□□□□ 0.2
TVP23C-203ENST00000428082 I3L4J1 428 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 BRCC3P46736 316 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 ARL4CP56559 192 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 TAZQ16635 292 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 TIGD5Q53EQ6 642 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 DENND1BQ6P3S1 775 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 TRABD2AQ86V40 505 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 CYP4X1Q8N118 509 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 SENP8Q96LD8 212 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 PWWP2AQ96N64 755 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 SMC6Q96SB8 1091 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 MRPL45Q9BRJ2 306 aaKnown RBP16.32■□□□□ 0.2
TVP23C-203ENST00000428082 CWH43Q9H720 699 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 VPS37BQ9H9H4 285 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 SSU72Q9NP77 194 aaKnown RBP16.32■□□□□ 0.2
TVP23C-203ENST00000428082 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.32■□□□□ 0.2
TVP23C-203ENST00000428082 KLHL14Q9P2G3 628 aa16.32■□□□□ 0.2
TVP23C-203ENST00000428082 LAMA2P24043 3122 aaKnown RBP16.32■□□□□ 0.2
TVP23C-203ENST00000428082 CYB561D2O14569 222 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 NRP1O14786 923 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 RNF8O76064 485 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 PBX3P40426 434 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 SLC11A1P49279 550 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 SLC25A11Q02978 314 aaKnown RBP16.31■□□□□ 0.2
TVP23C-203ENST00000428082 SPARCL1Q14515 664 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 RNF43Q68DV7 783 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 LIMS2Q7Z4I7 341 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 RSAD2Q8WXG1 361 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 HMGXB4Q9UGU5 601 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 NT5C1B-RDH14C9J2C7 533 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 GOLGA8SH3BPF8 625 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 HUS1O60921 280 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 GJB5O95377 273 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 TCF4P15884 667 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 CREB1P16220 341 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 KDELR1P24390 212 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 SLC8A1P32418 973 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 GBP2P32456 591 aaPredicted RBP16.31■□□□□ 0.2
TVP23C-203ENST00000428082 RFC1P35251 1148 aaPredicted RBP16.31■□□□□ 0.2
TVP23C-203ENST00000428082 MAGEA10P43363 369 aaPredicted RBP16.31■□□□□ 0.2
TVP23C-203ENST00000428082 HIF1AQ16665 826 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 SPRED3Q2MJR0 410 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 PTPN20Q4JDL3 420 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 ZC3H12AQ5D1E8 599 aaKnown RBP16.31■□□□□ 0.2
TVP23C-203ENST00000428082 CYP4A22Q5TCH4 519 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 DSTYKQ6XUX3 929 aa16.31■□□□□ 0.2
TVP23C-203ENST00000428082 RGS9BPQ6ZS82 235 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms