RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 BTBD8Q5XKL5 378 aa19.4■□□□□ 0.7
NUP50-207ENST00000424634 PM20D1Q6GTS8 502 aa19.4■□□□□ 0.7
NUP50-207ENST00000424634 FOXR2Q6PJQ5 311 aa19.4■□□□□ 0.7
NUP50-207ENST00000424634 PRR23CQ6ZRP0 262 aa19.4■□□□□ 0.7
NUP50-207ENST00000424634 TPGS1Q6ZTW0 290 aa19.4■□□□□ 0.7
NUP50-207ENST00000424634 BHLHA9Q7RTU4 235 aa19.4■□□□□ 0.7
NUP50-207ENST00000424634 RASSF3Q86WH2 238 aa19.4■□□□□ 0.7
NUP50-207ENST00000424634 MIB1Q86YT6 1006 aa19.4■□□□□ 0.7
NUP50-207ENST00000424634 UBA3Q8TBC4 463 aa19.4■□□□□ 0.7
NUP50-207ENST00000424634 KAT5Q92993 513 aa19.4■□□□□ 0.7
NUP50-207ENST00000424634 LOXL4Q96JB6 756 aa19.4■□□□□ 0.7
NUP50-207ENST00000424634 TPSD1Q9BZJ3 242 aa19.4■□□□□ 0.7
NUP50-207ENST00000424634 DEC1Q9P2X7 70 aa19.4■□□□□ 0.7
NUP50-207ENST00000424634 LSM7Q9UK45 103 aaKnown RBP19.4■□□□□ 0.7
NUP50-207ENST00000424634 TBC1D3BA6NDS4 549 aa19.39■□□□□ 0.69
NUP50-207ENST00000424634 GDF9O60383 454 aa19.39■□□□□ 0.69
NUP50-207ENST00000424634 EPN2O95208 641 aa19.39■□□□□ 0.69
NUP50-207ENST00000424634 RALAP11233 206 aa19.39■□□□□ 0.69
NUP50-207ENST00000424634 TKTL1P51854 596 aa19.39■□□□□ 0.69
NUP50-207ENST00000424634 GOLGA8FQ08AF8 430 aa19.39■□□□□ 0.69
NUP50-207ENST00000424634 GOLGA8DPQ0D2H9 430 aa19.39■□□□□ 0.69
NUP50-207ENST00000424634 EFEMP1Q12805 493 aa19.39■□□□□ 0.69
NUP50-207ENST00000424634 ANO7Q6IWH7 933 aa19.39■□□□□ 0.69
NUP50-207ENST00000424634 MDGA1Q8NFP4 955 aa19.39■□□□□ 0.69
NUP50-207ENST00000424634 TFAP2BQ92481 460 aa19.39■□□□□ 0.69
NUP50-207ENST00000424634 ZSWIM1Q9BR11 485 aa19.39■□□□□ 0.69
NUP50-207ENST00000424634 MARK1Q9P0L2 795 aa19.39■□□□□ 0.69
NUP50-207ENST00000424634 MED19A0JLT2 244 aaPredicted RBP19.38■□□□□ 0.69
NUP50-207ENST00000424634 NEDD8-MDP1E9PL57 170 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 O00370 1275 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 XPO1O14980 1071 aaKnown RBP19.38■□□□□ 0.69
NUP50-207ENST00000424634 ZBED1O96006 694 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 VDRP11473 427 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 TYRP14679 529 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 CD19P15391 556 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 TBXAS1P24557 533 aaPredicted RBP19.38■□□□□ 0.69
NUP50-207ENST00000424634 YWHAGP61981 247 aaKnown RBP eCLIP19.38■□□□□ 0.69
NUP50-207ENST00000424634 YWHAEP62258 255 aaKnown RBP19.38■□□□□ 0.69
NUP50-207ENST00000424634 PKDCCQ504Y2 493 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 THADAQ6YHU6 1953 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 TADA2BQ86TJ2 420 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 TRIM59Q8IWR1 403 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 TERB1Q8NA31 727 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 CNOT6LQ96LI5 555 aaKnown RBP19.38■□□□□ 0.69
NUP50-207ENST00000424634 NT5C1BQ96P26 610 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 BBS2Q9BXC9 721 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 ULBP1Q9BZM6 244 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 DNAJC17Q9NVM6 304 aaKnown RBP19.38■□□□□ 0.69
NUP50-207ENST00000424634 RASAL2Q9UJF2 1139 aa19.38■□□□□ 0.69
NUP50-207ENST00000424634 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.37■□□□□ 0.69
NUP50-207ENST00000424634 BICDL2A1A5D9 508 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 CACNG3O60359 315 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 GABBR2O75899 941 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 CALCAP01258 141 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 HMBSP08397 361 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 CISD3P0C7P0 127 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 SDHBP21912 280 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 BCAT1P54687 386 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 SLC8A3P57103 927 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 BST2Q10589 180 aaKnown RBP19.37■□□□□ 0.69
NUP50-207ENST00000424634 KCNH2Q12809 1159 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 PAK1Q13153 545 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 SF3A2Q15428 464 aaKnown RBP19.37■□□□□ 0.69
NUP50-207ENST00000424634 HSF5Q4G112 596 aaPredicted RBP19.37■□□□□ 0.69
NUP50-207ENST00000424634 PLA2G2CQ5R387 149 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 TMEM270Q6UE05 265 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 TOGARAM2Q6ZUX3 1019 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 ARHGEF19Q8IW93 802 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 PPM1KQ8N3J5 372 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 EHBP1Q8NDI1 1231 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 CDK5RAP1Q96SZ6 601 aaKnown RBP19.37■□□□□ 0.69
NUP50-207ENST00000424634 SRRTQ9BXP5 876 aaKnown RBP19.37■□□□□ 0.69
NUP50-207ENST00000424634 SMOC1Q9H4F8 434 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 PLK2Q9NYY3 685 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 WDR35Q9P2L0 1181 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 CDV3Q9UKY7 258 aaKnown RBP19.37■□□□□ 0.69
NUP50-207ENST00000424634 KIAA1257Q9ULG3 409 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 STARD13Q9Y3M8 1113 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 PCDHB4Q9Y5E5 795 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 NCOR2Q9Y618 2525 aa19.37■□□□□ 0.69
NUP50-207ENST00000424634 NUP205Q92621 2012 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 PRRT4C9JH25 899 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 P4HA2O15460 535 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 ZNF806P0C7X5 589 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 MARSP56192 900 aaKnown RBP19.36■□□□□ 0.69
NUP50-207ENST00000424634 COG7P83436 770 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 CAMK4Q16566 473 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 USP39Q53GS9 565 aaKnown RBP19.36■□□□□ 0.69
NUP50-207ENST00000424634 EOGTQ5NDL2 527 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 C10orf76Q5T2E6 689 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 GRAMD4Q6IC98 578 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 LCLAT1Q6UWP7 414 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 RRAGAQ7L523 313 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 ARHGAP18Q8N392 663 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 ZNF513Q8N8E2 541 aaPredicted RBP19.36■□□□□ 0.69
NUP50-207ENST00000424634 OLIG1Q8TAK6 271 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 KCNV2Q8TDN2 545 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 BHMTQ93088 406 aa19.36■□□□□ 0.69
NUP50-207ENST00000424634 XPO6Q96QU8 1125 aaKnown RBP19.36■□□□□ 0.69
NUP50-207ENST00000424634 MED15Q96RN5 788 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms