RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 GMEB2Q9UKD1 530 aa16.07■□□□□ 0.16
NUP50-204ENST00000417702 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.07■□□□□ 0.16
NUP50-204ENST00000417702 SDK1Q7Z5N4 2213 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 HRO43593 1189 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 STC2O76061 302 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 LCP1P13796 627 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 ZNF132P52740 706 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 MFAP3P55082 362 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 MRPS21P82921 87 aaKnown RBP16.06■□□□□ 0.16
NUP50-204ENST00000417702 KDSRQ06136 332 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 TPGS1Q6ZTW0 290 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 CEP68Q76N32 757 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 IRF2BP1Q8IU81 584 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 NAT16Q8N8M0 369 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 RNF139Q8WU17 664 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 SLC35F5Q8WV83 523 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 NDRG1Q92597 394 aaKnown RBP16.06■□□□□ 0.16
NUP50-204ENST00000417702 XPO6Q96QU8 1125 aaKnown RBP16.06■□□□□ 0.16
NUP50-204ENST00000417702 HHIPQ96QV1 700 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 BBS2Q9BXC9 721 aa16.06■□□□□ 0.16
NUP50-204ENST00000417702 OLA1Q9NTK5 396 aaKnown RBP16.06■□□□□ 0.16
NUP50-204ENST00000417702 A0A0A0MRY4 1105 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 SLC12A8A0AV02 714 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 GTPBP10A4D1E9 387 aaKnown RBP16.05■□□□□ 0.16
NUP50-204ENST00000417702 TBC1D3BA6NDS4 549 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 NEDD8-MDP1E9PL57 170 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 TULP3O75386 442 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 APBB3O95704 486 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 HMBSP08397 361 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 TNFRSF4P43489 277 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 PXNP49023 591 aaPredicted RBP16.05■□□□□ 0.16
NUP50-204ENST00000417702 RGS7P49802 495 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 LPAL2Q16609 132 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 MAN2A1Q16706 1144 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 EXOC3L4Q17RC7 722 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 HSF5Q4G112 596 aaPredicted RBP16.05■□□□□ 0.16
NUP50-204ENST00000417702 CT47A1Q5JQC4 288 aaPredicted RBP16.05■□□□□ 0.16
NUP50-204ENST00000417702 BSPRYQ5W0U4 402 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 LAIR1Q6GTX8 287 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 TRIM65Q6PJ69 517 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 Q6ZNB5 142 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 ETFBKMTQ8IXQ9 262 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 SCML4Q8N228 414 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 DCLK2Q8N568 766 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 HSFY1Q96LI6 401 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 ZSWIM1Q9BR11 485 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 POLR3BQ9NW08 1133 aaPredicted RBP16.05■□□□□ 0.16
NUP50-204ENST00000417702 MARK1Q9P0L2 795 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 CNTN6Q9UQ52 1028 aa16.05■□□□□ 0.16
NUP50-204ENST00000417702 AXIN1O15169 862 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 MED7O43513 233 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 TYRP14679 529 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 SLC9A1P19634 815 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 CORO1AP31146 461 aaKnown RBP16.04■□□□□ 0.16
NUP50-204ENST00000417702 HOXC13P31276 330 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 CHKAP35790 457 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 SRSF5Q13243 272 aaKnown RBP16.04■□□□□ 0.16
NUP50-204ENST00000417702 GRAMD4Q6IC98 578 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 PMF1Q6P1K2 205 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 KIAA2013Q8IYS2 634 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 CCDC33Q8N5R6 958 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 GPR161Q8N6U8 529 aaKnown RBP16.04■□□□□ 0.16
NUP50-204ENST00000417702 TSTD1Q8NFU3 115 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 GOLGA1Q92805 767 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 ABCC13Q9NSE7 274 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 DNAJC17Q9NVM6 304 aaKnown RBP16.04■□□□□ 0.16
NUP50-204ENST00000417702 APEX2Q9UBZ4 518 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 MMP17Q9ULZ9 603 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 USP34Q70CQ2 3546 aa16.04■□□□□ 0.16
NUP50-204ENST00000417702 MYO15AQ9UKN7 3530 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 MYO18AQ92614 2054 aaKnown RBP16.03■□□□□ 0.16
NUP50-204ENST00000417702 YJEFN3A6XGL0 299 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 E7ENQ6 273 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 CACNG3O60359 315 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 RPP40O75818 363 aaKnown RBP16.03■□□□□ 0.16
NUP50-204ENST00000417702 FBXO21O94952 628 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 KLF8O95600 359 aaPredicted RBP16.03■□□□□ 0.16
NUP50-204ENST00000417702 CALCAP01258 141 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 KLKB1P03952 638 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 PRKCSHP14314 528 aaPredicted RBP16.03■□□□□ 0.16
NUP50-204ENST00000417702 TIE1P35590 1138 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 USP8P40818 1118 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 DAOAP59103 153 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 MESP2Q0VG99 397 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 ARHGAP44Q17R89 818 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 EOGTQ5NDL2 527 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 BHLHA9Q7RTU4 235 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.03■□□□□ 0.16
NUP50-204ENST00000417702 FMNL3Q8IVF7 1028 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 SFTPA1Q8IWL2 248 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 PHTF2Q8N3S3 785 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 TERB1Q8NA31 727 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 GAB3Q8WWW8 586 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 IRGQQ8WZA9 623 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 EDEM1Q92611 657 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 PLD4Q96BZ4 506 aa16.03■□□□□ 0.16
NUP50-204ENST00000417702 HBS1LQ9Y450 684 aaKnown RBP16.03■□□□□ 0.16
NUP50-204ENST00000417702 PIK3R2O00459 728 aa16.02■□□□□ 0.16
NUP50-204ENST00000417702 THAP12O43422 761 aa16.02■□□□□ 0.16
NUP50-204ENST00000417702 LETM1O95202 739 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms