RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 RAVER1Q8IY67 606 aaKnown RBP15.3■□□□□ 0.04
HOXA3-201ENST00000317201 RASGEF1CQ8N431 466 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 ZNF564Q8TBZ8 553 aaPredicted RBP15.3■□□□□ 0.04
HOXA3-201ENST00000317201 NUP85Q9BW27 656 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 PLVAPQ9BX97 442 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 TRPV5Q9NQA5 729 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 KIAA1257Q9ULG3 409 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 NOC2LQ9Y3T9 749 aaKnown RBP15.3■□□□□ 0.04
HOXA3-201ENST00000317201 FKTNO75072 461 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 CILPO75339 1184 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 PDE5AO76074 875 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 RECQL4O94761 1208 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 WEE2P0C1S8 567 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 TBL3Q12788 808 aaKnown RBP15.3■□□□□ 0.04
HOXA3-201ENST00000317201 PTK7Q13308 1070 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 ZNF394Q53GI3 561 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 FAAH2Q6GMR7 532 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 PACS1Q6VY07 963 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 ENDOVQ8N8Q3 282 aaKnown RBP15.3■□□□□ 0.04
HOXA3-201ENST00000317201 STKLD1Q8NE28 680 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 GDAP1Q8TB36 358 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 PPP2R3CQ969Q6 453 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 ZMAT2Q96NC0 199 aaKnown RBP15.3■□□□□ 0.04
HOXA3-201ENST00000317201 TBC1D10AQ9BXI6 508 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 NXF3Q9H4D5 531 aaKnown RBP15.3■□□□□ 0.04
HOXA3-201ENST00000317201 NXF1Q9UBU9 619 aaKnown RBP15.3■□□□□ 0.04
HOXA3-201ENST00000317201 POLIQ9UNA4 740 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 SQORQ9Y6N5 450 aa15.3■□□□□ 0.04
HOXA3-201ENST00000317201 CAPN9O14815 690 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 STK10O94804 968 aaKnown RBP15.29■□□□□ 0.04
HOXA3-201ENST00000317201 OXSR1O95747 527 aaPredicted RBP15.29■□□□□ 0.04
HOXA3-201ENST00000317201 ATF7P17544 494 aaPredicted RBP15.29■□□□□ 0.04
HOXA3-201ENST00000317201 CD58P19256 250 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 FAM26DQ5JW98 314 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 RFX8Q6ZV50 586 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 SIX5Q8N196 739 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 TMEM35BQ8NCS4 154 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 NDEL1Q9GZM8 345 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 DRC3Q9H069 523 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 MIS12Q9H081 205 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 MRPL47Q9HD33 250 aaKnown RBP15.29■□□□□ 0.04
HOXA3-201ENST00000317201 GPR182O15218 404 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 TNNC1P63316 161 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 PPFIBP2Q8ND30 876 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 SEZ6LQ9BYH1 1024 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 WNT8AQ9H1J5 351 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 ARL2BPQ9Y2Y0 163 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 IPPQ9Y573 584 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 ALG6Q9Y672 507 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 SCINQ9Y6U3 715 aa15.29■□□□□ 0.04
HOXA3-201ENST00000317201 KCNK3O14649 394 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 DDX3YO15523 660 aaKnown RBP15.28■□□□□ 0.04
HOXA3-201ENST00000317201 CHRNA1P02708 482 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 CALB1P05937 261 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 PORP16435 677 aaPredicted RBP15.28■□□□□ 0.04
HOXA3-201ENST00000317201 MMP8P22894 467 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 PNPLA4P41247 253 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 TRPC1P48995 793 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 PTP4A2Q12974 167 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 FAM47CQ5HY64 1035 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 KLHL35Q6PF15 583 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 HACE1Q8IYU2 909 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 ANKRD42Q8N9B4 389 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 SMG8Q8ND04 991 aaKnown RBP15.28■□□□□ 0.04
HOXA3-201ENST00000317201 CPA5Q8WXQ8 436 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 HESX1Q9UBX0 185 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 RBMX2Q9Y388 322 aaKnown RBP15.28■□□□□ 0.04
HOXA3-201ENST00000317201 FOXO6A8MYZ6 492 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 TLR3O15455 904 aaKnown RBP15.28■□□□□ 0.04
HOXA3-201ENST00000317201 OAS1P00973 400 aaKnown RBP15.28■□□□□ 0.04
HOXA3-201ENST00000317201 CDK4P11802 303 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 CCNB1P14635 433 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 MMP13P45452 471 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 ACLYP53396 1101 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 UBAP2Q5T6F2 1119 aaKnown RBP15.28■□□□□ 0.04
HOXA3-201ENST00000317201 PLEKHA7Q6IQ23 1121 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 SCARA5Q6ZMJ2 495 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 LRRC74BQ6ZQY2 392 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 MARK2Q7KZI7 788 aaKnown RBP15.28■□□□□ 0.04
HOXA3-201ENST00000317201 SLC43A3Q8NBI5 491 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 DQX1Q8TE96 717 aaKnown RBP15.28■□□□□ 0.04
HOXA3-201ENST00000317201 TMEM176AQ96HP8 235 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 SDCBP2Q9H190 292 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 MYLK2Q9H1R3 596 aa15.28■□□□□ 0.04
HOXA3-201ENST00000317201 SMIM28A0A1B0GU29 152 aa15.27■□□□□ 0.04
HOXA3-201ENST00000317201 CALCAP01258 141 aa15.27■□□□□ 0.04
HOXA3-201ENST00000317201 CTNNA2P26232 953 aa15.27■□□□□ 0.04
HOXA3-201ENST00000317201 SLC1A1P43005 524 aa15.27■□□□□ 0.04
HOXA3-201ENST00000317201 CDK7P50613 346 aa15.27■□□□□ 0.04
HOXA3-201ENST00000317201 ARPC4P59998 168 aa15.27■□□□□ 0.04
HOXA3-201ENST00000317201 UBL4BQ8N7F7 174 aa15.27■□□□□ 0.04
HOXA3-201ENST00000317201 USP38Q8NB14 1042 aa15.27■□□□□ 0.04
HOXA3-201ENST00000317201 SLC4A11Q8NBS3 891 aa15.27■□□□□ 0.04
HOXA3-201ENST00000317201 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.27■□□□□ 0.04
HOXA3-201ENST00000317201 ARHGEF2Q92974 986 aaKnown RBP15.27■□□□□ 0.04
HOXA3-201ENST00000317201 ERP27Q96DN0 273 aa15.27■□□□□ 0.04
HOXA3-201ENST00000317201 DDX47Q9H0S4 455 aaKnown RBP15.27■□□□□ 0.04
HOXA3-201ENST00000317201 SMYD3Q9H7B4 428 aa15.27■□□□□ 0.04
HOXA3-201ENST00000317201 TMEM59LQ9UK28 342 aa15.27■□□□□ 0.04
HOXA3-201ENST00000317201 ST3GAL5Q9UNP4 418 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms