RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ZNF177Q13360 481 aaPredicted RBP17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 RSPH9Q9H1X1 276 aaPredicted RBP17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 RPS6KB2Q9UBS0 482 aa17.28■□□□□ 0.36
TSPAN3-201ENST00000267970 PNPLA7Q6ZV29 1317 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 ATXN2Q99700 1313 aaKnown RBP17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 LGR5O75473 907 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 CD4P01730 458 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 OLFML1Q6UWY5 402 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 PACS2Q86VP3 889 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 COLGALT1Q8NBJ5 622 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 AVENQ9NQS1 362 aaPredicted RBP17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 USP18Q9UMW8 372 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 BCL10O95999 233 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 GH1P01241 217 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 ISCA1Q9BUE6 129 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 CCDC167Q9P0B6 97 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 ZNF624Q9P2J8 865 aaPredicted RBP17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 CNOT7Q9UIV1 285 aaKnown RBP17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 SSTR1P30872 391 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 ANGEL2Q5VTE6 544 aaKnown RBP17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 TSHZ1Q6ZSZ6 1077 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 SLC5A5Q92911 643 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 FAM120BQ96EK7 910 aaKnown RBP17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 RNF145Q96MT1 663 aa17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 ALDH8A1Q9H2A2 487 aaPredicted RBP17.27■□□□□ 0.36
TSPAN3-201ENST00000267970 FOXP2O15409 715 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 KCNJ6P48051 423 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 RCAN1P53805 252 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 NUP107P57740 925 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 EN1Q05925 392 aaPredicted RBP17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 CAMK2GQ13555 558 aaPredicted RBP17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 KYAT1Q16773 422 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 TDRD10Q5VZ19 366 aaKnown RBP17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 C16orf46Q6P387 395 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 RTL3Q8N8U3 475 aaKnown RBP17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 TDRKHQ9Y2W6 561 aaKnown RBP17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 CDK12Q9NYV4 1490 aaPredicted RBP17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 TTLL13PA6NNM8 815 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 CFAP99D6REC4 459 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 TNFRSF21O75509 655 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 IL12RB1P42701 662 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 MAPK9P45984 424 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 TMEM26Q6ZUK4 368 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 NANOGNBQ7Z5D8 188 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 RMND5AQ9H871 391 aa17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 ZMYND8Q9ULU4 1186 aaPredicted RBP17.27■□□□□ 0.35
TSPAN3-201ENST00000267970 EME2A4GXA9 379 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 FAM58BPP0C7Q3 252 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 CCNG1P51959 295 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 MACC1Q6ZN28 852 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 RD3Q7Z3Z2 195 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 PPP1R13LQ8WUF5 828 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 CBX4O00257 560 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 O00370 1275 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 CNOT3O75175 753 aaKnown RBP17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 IL18RAPO95256 599 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 ZNF37AP17032 561 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 ACADSBP45954 432 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 TCP10LQ8TDR4 215 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 ATG4CQ96DT6 458 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 FGD3Q5JSP0 725 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 TRIQKQ629K1 86 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 SPOCD1Q6ZMY3 1216 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 ITGADQ13349 1161 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 SLFN11Q7Z7L1 901 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 TATDN2Q93075 761 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 DCLRE1BQ9H816 532 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 LIMD1Q9UGP4 676 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 CASTOR2A6NHX0 329 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 PEX5P50542 639 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 YWHAZP63104 245 aaKnown RBP17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 ZKSCAN4Q969J2 545 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 VPS45Q9NRW7 570 aa17.26■□□□□ 0.35
TSPAN3-201ENST00000267970 IGSF9BQ9UPX0 1349 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 ARHGAP31Q2M1Z3 1444 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 LOC100506127A0A0U1RQW1 187 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 ARP10275 920 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 MBL2P11226 248 aaPredicted RBP17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 DNAJB2P25686 324 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 NOS3P29474 1203 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 THPOP40225 353 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 CYP4F2P78329 520 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 CYP4F3Q08477 520 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 ZNF618Q5T7W0 954 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 IER5Q5VY09 327 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 ABCG8Q9H221 673 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 A0A0U1RQJ8 604 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 ANXA9O76027 345 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 PTPN4P29074 926 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 FDFT1P37268 417 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 PHACTR4Q8IZ21 702 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 DPP10Q8N608 796 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 RAD21L1Q9H4I0 556 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 MAN1C1Q9NR34 630 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 H3BN98 237 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 SNX17Q15036 470 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 STILQ15468 1287 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 NEK10Q6ZWH5 1172 aa17.25■□□□□ 0.35
TSPAN3-201ENST00000267970 ARHGAP22Q7Z5H3 698 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms