RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 KHSRPQ92945 711 aaKnown RBP eCLIP20.47■□□□□ 0.871e-9■■■□□ 16.6
NEIL3-201ENST00000264596 C2CD2Q9Y426 696 aa20.47■□□□□ 0.87
NEIL3-201ENST00000264596 TRIP11Q15643 1979 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 SLC15A5A6NIM6 579 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 PPEF2O14830 753 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 TSPAN1O60635 241 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 CYP2F1P24903 491 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 HDAC4P56524 1084 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 GBE1Q04446 702 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 ARHGAP1Q07960 439 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 TRIM68Q6AZZ1 485 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 MPP5Q8N3R9 675 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 TEKT4Q8WW24 435 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 FRMD8Q9BZ67 464 aaPredicted RBP20.46■□□□□ 0.87
NEIL3-201ENST00000264596 ARMCX1Q9P291 453 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 F5H423 210 aaPredicted RBP20.46■□□□□ 0.87
NEIL3-201ENST00000264596 GYG2O15488 501 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 PAPSS1O43252 624 aaPredicted RBP20.46■□□□□ 0.87
NEIL3-201ENST00000264596 APOEP02649 317 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 PRKCHP24723 683 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 MRPS5P82675 430 aaKnown RBP20.46■□□□□ 0.87
NEIL3-201ENST00000264596 TRMT10BQ6PF06 316 aaKnown RBP20.46■□□□□ 0.87
NEIL3-201ENST00000264596 RINLQ6ZS11 566 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 ALYREFQ86V81 257 aaKnown RBP20.46■□□□□ 0.87
NEIL3-201ENST00000264596 FAM167BQ9BTA0 163 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 DHX35Q9H5Z1 703 aaKnown RBP20.46■□□□□ 0.87
NEIL3-201ENST00000264596 NRDE2Q9H7Z3 1164 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 PLLPQ9Y342 182 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 NME7Q9Y5B8 376 aa20.46■□□□□ 0.87
NEIL3-201ENST00000264596 EIF4E1BA6NMX2 242 aaKnown RBP20.45■□□□□ 0.86
NEIL3-201ENST00000264596 CYB561D2O14569 222 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 DNAJC6O75061 913 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 RFPL1O75677 317 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 GABBR2O75899 941 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 TMPRSS15P98073 1019 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 POU5F1BQ06416 359 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 LGSNQ5TDP6 509 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 DSTYKQ6XUX3 929 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 C4orf50Q6ZRC1 276 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 ENDOVQ8N8Q3 282 aaKnown RBP20.45■□□□□ 0.86
NEIL3-201ENST00000264596 FBXO41Q8TF61 875 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 CLEC4CQ8WTT0 213 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 OXNAD1Q96HP4 312 aaPredicted RBP20.45■□□□□ 0.86
NEIL3-201ENST00000264596 NAF1Q96HR8 494 aaKnown RBP20.45■□□□□ 0.86
NEIL3-201ENST00000264596 LBHD1Q9BQE6 289 aaPredicted RBP20.45■□□□□ 0.86
NEIL3-201ENST00000264596 ZNF395Q9H8N7 513 aaPredicted RBP20.45■□□□□ 0.86
NEIL3-201ENST00000264596 RNF19AQ9NV58 838 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 PCMTD2Q9NV79 361 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 ZNF180Q9UJW8 692 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 I3L4J1 428 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 FCHO1O14526 889 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 HCRTO43612 131 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 IREB2P48200 963 aaKnown RBP20.45■□□□□ 0.86
NEIL3-201ENST00000264596 KHDC1Q4VXA5 237 aaKnown RBP20.45■□□□□ 0.86
NEIL3-201ENST00000264596 ARMCX2Q7L311 632 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 IFNLR1Q8IU57 520 aaPredicted RBP20.45■□□□□ 0.86
NEIL3-201ENST00000264596 CDKL3Q8IVW4 592 aaPredicted RBP20.45■□□□□ 0.86
NEIL3-201ENST00000264596 SULF1Q8IWU6 871 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 VPS52Q8N1B4 723 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 LINC01465Q8N7H1 131 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 TBCBQ99426 244 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 ZNF670Q9BS34 389 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 SLC4A5Q9BY07 1137 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 NR2E3Q9Y5X4 410 aa20.45■□□□□ 0.86
NEIL3-201ENST00000264596 TRDMT1O14717 391 aaKnown RBP20.44■□□□□ 0.86
NEIL3-201ENST00000264596 GSC2O15499 205 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 ESRRAP11474 423 aaPredicted RBP20.44■□□□□ 0.86
NEIL3-201ENST00000264596 GRIA1P42261 906 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 BST1Q10588 318 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 SLC10A2Q12908 348 aaPredicted RBP20.44■□□□□ 0.86
NEIL3-201ENST00000264596 STILQ15468 1287 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 PKDCCQ504Y2 493 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 MROH9Q5TGP6 573 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 ZNF534Q76KX8 674 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 SESTD1Q86VW0 696 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 C7orf31Q8N865 590 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 TUBB6Q9BUF5 446 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 NMUR2Q9GZQ4 415 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 BATF3Q9NR55 127 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 HESX1Q9UBX0 185 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 GINS2Q9Y248 185 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 CITO14578 2027 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 SCN1AP35498 2009 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 MDM4O15151 490 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 KITP10721 976 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 DESP17661 470 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 PAX7P23759 505 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 PTDSS1P48651 473 aaKnown RBP20.44■□□□□ 0.86
NEIL3-201ENST00000264596 SESN3P58005 492 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 CHI3L2Q15782 390 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 KYAT1Q16773 422 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 CES4AQ5XG92 561 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 APBB1IPQ7Z5R6 666 aaPredicted RBP20.44■□□□□ 0.86
NEIL3-201ENST00000264596 ERO1BQ86YB8 467 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 TTC39CQ8N584 583 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 SLC35F5Q8WV83 523 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 AFG1LQ8WV93 481 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 MCUR1Q96AQ8 359 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 E2F7Q96AV8 911 aa20.44■□□□□ 0.86
NEIL3-201ENST00000264596 DCPSQ96C86 337 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms