RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 C3orf70A6NLC5 250 aaPredicted RBP18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 SPDYE16A6NNV3 312 aaPredicted RBP18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 KLHL2O95198 593 aa18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 C1QAP02745 245 aa18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 ATP6V1B1P15313 513 aa18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 BACE1P56817 501 aa18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 WDR44Q5JSH3 913 aa18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 C15orf39Q6ZRI6 1047 aa18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 USP50Q70EL3 339 aaPredicted RBP18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 CCDC33Q8N5R6 958 aa18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 ZNF280CQ8ND82 737 aa18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 TMEM161BQ8NDZ6 487 aa18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 CYP4F11Q9HBI6 524 aa18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 BTBD7Q9P203 1132 aa18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 PCDHB4Q9Y5E5 795 aa18.32■□□□□ 0.52
CDKN1B-201ENST00000228872 MAGEB3O15480 346 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 RFPL1O75677 317 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 KRT37O76014 449 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 BPGMP07738 259 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 STX3Q13277 289 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 TCHHL1Q5QJ38 904 aaPredicted RBP18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 LMBRD2Q68DH5 695 aaPredicted RBP18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 ZCCHC23Q6ZST2 131 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 KBTBD6Q86V97 674 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 HPS6Q86YV9 775 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 CTAGE3PQ8IX95 158 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 C12orf42Q96LP6 360 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 Q9H521 79 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 ZNF696Q9H7X3 374 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 XAB2Q9HCS7 855 aaKnown RBP18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 MKS1Q9NXB0 559 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 AGTPBP1Q9UPW5 1226 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 TTLL3Q9Y4R7 772 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 ARHGAP10A1A4S6 786 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 SPAG6O75602 509 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 SLC5A2P31639 672 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 TMEM270Q6UE05 265 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 AHI1Q8N157 1196 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 LRRC43Q8N309 656 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 EFCAB3Q8N7B9 438 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 NLRP4Q96MN2 994 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 APOL6Q9BWW8 343 aa18.31■□□□□ 0.52
CDKN1B-201ENST00000228872 CST8O60676 142 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 USP2O75604 605 aaPredicted RBP18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 HLA-DRAP01903 254 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 MMP8P22894 467 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 L1CAMP32004 1257 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 MYBPC1Q00872 1141 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 SPP2Q13103 211 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 CBX3Q13185 183 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 SH3D19Q5HYK7 790 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 FAM102BQ5T8I3 360 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 NUP93Q8N1F7 819 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 CFAP36Q96G28 342 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 FRMD8P1Q9BZ68 369 aaPredicted RBP18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 EHMT1Q9H9B1 1298 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 PNPLA8Q9NP80 782 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 THAP1Q9NVV9 213 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 FZD1Q9UP38 647 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 PTPRFP10586 1907 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 CXorf49A8MYA2 514 aaPredicted RBP18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 TNFAIP8O95379 198 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 CRTAMO95727 393 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 ICAM1P05362 532 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 ITGAXP20702 1163 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 SULF1Q8IWU6 871 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 DEFB107AQ8IZN7 70 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 FAM71DQ8N9W8 422 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 ZBTB8BQ8NAP8 495 aaPredicted RBP18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 ZNF778Q96MU6 729 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 ZNF180Q9UJW8 692 aa18.3■□□□□ 0.52
CDKN1B-201ENST00000228872 TCRBV5S1A1TA0A578 114 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 C19orf81C9J6K1 198 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 PLOD1Q02809 727 aaPredicted RBP18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 APOFQ13790 326 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 BMPR2Q13873 1038 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 DPYSL3Q14195 570 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 KRT81Q14533 505 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 PPP1R2P3Q6NXS1 205 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 DNAJC24Q6P3W2 148 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 BORAQ6PGQ7 559 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 DCUN1D2Q6PH85 259 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 TSHZ1Q6ZSZ6 1077 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 BBS12Q6ZW61 710 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 PQLC1Q8N2U9 271 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 GPD1LQ8N335 351 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 ZC3H15Q8WU90 426 aaKnown RBP18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 SHCBP1LQ9BZQ2 653 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 CCPG1Q9ULG6 757 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 BIRC5O15392 142 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 SIN3BO75182 1162 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 TRMUO75648 421 aaKnown RBP18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 NPTX2P47972 431 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 CLCN2P51788 898 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 NRLP54845 237 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 DGKZQ13574 1117 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 CUL2Q13617 745 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 WDR75Q8IWA0 830 aaKnown RBP18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 FBXW8Q8N3Y1 598 aa18.29■□□□□ 0.52
CDKN1B-201ENST00000228872 MXRA8Q9BRK3 442 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms