RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 L1CAMP32004 1257 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 NRLP54845 237 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 SLC8A3P57103 927 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 BASP1P80723 227 aaKnown RBP20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 NR1H3Q13133 447 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 MSS51Q4VC12 460 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 WSCD1Q658N2 575 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 STRADAQ7RTN6 431 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 YTHDF3Q7Z739 585 aaKnown RBP20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 RPAINQ86UA6 219 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 PYROXD1Q8WU10 500 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 SEC16BQ96JE7 1060 aa20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 XPO7Q9UIA9 1087 aaKnown RBP20.52■□□□□ 0.88
PCDHB11-202ENST00000624887 BCLAF3A2AJT9 711 aaKnown RBP20.52■□□□□ 0.87
PCDHB11-202ENST00000624887 RARBP10826 455 aa20.52■□□□□ 0.87
PCDHB11-202ENST00000624887 MLH1P40692 756 aa20.52■□□□□ 0.87
PCDHB11-202ENST00000624887 ATXN1P54253 815 aaKnown RBP20.52■□□□□ 0.87
PCDHB11-202ENST00000624887 GPX6P59796 221 aa20.52■□□□□ 0.87
PCDHB11-202ENST00000624887 RASA2Q15283 850 aa20.52■□□□□ 0.87
PCDHB11-202ENST00000624887 PPP6R3Q5H9R7 873 aaPredicted RBP20.52■□□□□ 0.87
PCDHB11-202ENST00000624887 GKAP1Q5VSY0 366 aaPredicted RBP20.52■□□□□ 0.87
PCDHB11-202ENST00000624887 C6orf89Q6UWU4 347 aa20.52■□□□□ 0.87
PCDHB11-202ENST00000624887 ANKMY2Q8IV38 441 aa20.52■□□□□ 0.87
PCDHB11-202ENST00000624887 UBN1Q9NPG3 1134 aa20.52■□□□□ 0.87
PCDHB11-202ENST00000624887 GABRQQ9UN88 632 aa20.52■□□□□ 0.87
PCDHB11-202ENST00000624887 HEY1Q9Y5J3 304 aa20.52■□□□□ 0.87
PCDHB11-202ENST00000624887 CLUHO75153 1309 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 BANF1O75531 89 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 RPLP2P05387 115 aaKnown RBP20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 THP07101 528 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 CTSHP09668 335 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 NPR3P17342 541 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 CYP2F1P24903 491 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 MATKP42679 507 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 MGAT3Q09327 533 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 PAQR9Q6ZVX9 377 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 SRRM1Q8IYB3 904 aaKnown RBP20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 PDIK1LQ8N165 341 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 TAB3Q8N5C8 712 aaPredicted RBP20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 ATP11CQ8NB49 1132 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 SENP8Q96LD8 212 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 GAD1Q99259 594 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 NRDE2Q9H7Z3 1164 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 KCNK9Q9NPC2 374 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 PAK5Q9P286 719 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 SLC24A2Q9UI40 661 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 AP4E1Q9UPM8 1137 aa20.51■□□□□ 0.87
PCDHB11-202ENST00000624887 SEPT4O43236 478 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 IGFBP6P24592 240 aaPredicted RBP20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 ACAT1P24752 427 aaKnown RBP20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 PHBP35232 272 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 FLT3LGP49771 235 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 RNASELQ05823 741 aaKnown RBP20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 ADCY1Q08828 1119 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 ADIGQ0VDE8 80 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 TMED2Q15363 201 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 KCTD13Q8WZ19 329 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 WDR83Q9BRX9 315 aaKnown RBP20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 DHX35Q9H5Z1 703 aaKnown RBP20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 MTMR10Q9NXD2 777 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 FETUBQ9UGM5 382 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 RASA4BC9J798 803 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 POC1B-GALNT4F8VUJ3 575 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 CLDN5O00501 218 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 CHADO15335 359 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 RASA4O43374 803 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 KIAA0754O94854 1291 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 TSHRP16473 764 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 ZFXP17010 805 aaPredicted RBP20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 IFNAR2P48551 515 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 MPP2Q14168 576 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 KCNJ11Q14654 390 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 SLC25A52Q3SY17 297 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 EFHC2Q5JST6 749 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 CAPN12Q6ZSI9 719 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 TRABD2AQ86V40 505 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 CACNA2D3Q8IZS8 1091 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 GIT1Q9Y2X7 761 aa20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.5■□□□□ 0.87
PCDHB11-202ENST00000624887 TRIM66O15016 1216 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 GPR182O15218 404 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 KCNN4O15554 427 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 BEST1O76090 585 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 RBL1P28749 1068 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 APLP1P51693 650 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 AFF1P51825 1210 aaKnown RBP20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 MRPS5P82675 430 aaKnown RBP20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 CBLBQ13191 982 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 LRRC14Q15048 493 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 KIAA0319Q5VV43 1072 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 LRRC34Q8IZ02 419 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 DEFB106AQ8N104 65 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 TMEM86AQ8N2M4 240 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 CCDC185Q8N715 623 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 FBXO36Q8NEA4 188 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 DYDC1Q8WWB3 177 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 MIOSQ9NXC5 875 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 DDX43Q9NXZ2 648 aaKnown RBP20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 CACNG4Q9UBN1 327 aa20.49■□□□□ 0.87
PCDHB11-202ENST00000624887 RABGEF1Q9UJ41 708 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms