RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 JAKMIP2Q96AA8 810 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 OTUB2Q96DC9 234 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 EDEM2Q9BV94 578 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 LSM14BQ9BX40 385 aaKnown RBP11.8□□□□□ -0.52
TARDBP-221ENST00000619555 NACA2Q9H009 215 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 APOBEC3GQ9HC16 384 aaKnown RBP11.8□□□□□ -0.52
TARDBP-221ENST00000619555 CSNK1G1Q9HCP0 422 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 MAPK8IP1Q9UQF2 711 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 FRMD4BQ9Y2L6 1034 aa11.8□□□□□ -0.52
TARDBP-221ENST00000619555 TBC1D3BA6NDS4 549 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 PCNX2A6NKB5 2137 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 PATE3B3GLJ2 98 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 IKBKBO14920 756 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 HOXC11O43248 304 aaPredicted RBP11.79□□□□□ -0.52
TARDBP-221ENST00000619555 CALUO43852 315 aaPredicted RBP11.79□□□□□ -0.52
TARDBP-221ENST00000619555 KCNK5O95279 499 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 FAM200BP0CF97 657 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 TRIM49P0CI25 452 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 TRIM49CP0CI26 452 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 PIK3CAP42336 1068 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 GCLMP48507 274 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 DHPSP49366 369 aaPredicted RBP11.79□□□□□ -0.52
TARDBP-221ENST00000619555 VAMP7P51809 220 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 PPP3CAQ08209 521 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 ANO4Q32M45 955 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 EOGTQ5NDL2 527 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 BTBD8Q5XKL5 378 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 CYP2U1Q7Z449 544 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 C11orf74Q86VG3 221 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 HMGB4Q8WW32 186 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 PIGKQ92643 395 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 HNRNPABQ99729 332 aaKnown RBP11.79□□□□□ -0.52
TARDBP-221ENST00000619555 KLF16Q9BXK1 252 aaPredicted RBP11.79□□□□□ -0.52
TARDBP-221ENST00000619555 FBXO44Q9H4M3 255 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 POLMQ9NP87 494 aaPredicted RBP11.79□□□□□ -0.52
TARDBP-221ENST00000619555 SPHK2Q9NRA0 654 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 OSER1Q9NX31 292 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 BCCIPQ9P287 314 aaKnown RBP eCLIP11.79□□□□□ -0.52
TARDBP-221ENST00000619555 DEC1Q9P2X7 70 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 MBD1Q9UIS9 605 aaPredicted RBP11.79□□□□□ -0.52
TARDBP-221ENST00000619555 HCN2Q9UL51 889 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 TRAF3IP3Q9Y228 551 aa11.79□□□□□ -0.52
TARDBP-221ENST00000619555 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 TCRBV21S2A2A0A5A6 115 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 LNP1A1A4G5 178 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 HHLA1C9JL84 531 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 KHNYNO15037 678 aaKnown RBP11.78□□□□□ -0.52
TARDBP-221ENST00000619555 MDM4O15151 490 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 CYP26A1O43174 497 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 GREM1O60565 184 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 RHOBTB3O94955 611 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 MYL1P05976 194 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 CD58P19256 250 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 NR2F2P24468 414 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 PMLP29590 882 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 P2RY2P41231 377 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 WASP42768 502 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 UBE2HP62256 183 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 INCA1Q0VD86 236 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 MAP7D1Q3KQU3 841 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 HSF5Q4G112 596 aaPredicted RBP11.78□□□□□ -0.52
TARDBP-221ENST00000619555 CLEC20AQ6ZU45 233 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 HTR3DQ70Z44 454 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 ARMCX6Q7L4S7 300 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 MIB1Q86YT6 1006 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 TMEFF1Q8IYR6 380 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 PGBD3Q8N328 593 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 TAS1R2Q8TE23 839 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 WHAMMQ8TF30 809 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 CYFIP2Q96F07 1278 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 TIGD1Q96MW7 591 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 DUSP9Q99956 384 aaKnown RBP11.78□□□□□ -0.52
TARDBP-221ENST00000619555 MMRN2Q9H8L6 949 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 NMUR1Q9HB89 426 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 TLR8Q9NR97 1041 aaKnown RBP11.78□□□□□ -0.52
TARDBP-221ENST00000619555 NUDT5Q9UKK9 219 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 SCML2Q9UQR0 700 aa11.78□□□□□ -0.52
TARDBP-221ENST00000619555 IGF2RP11717 2491 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 A0A1W2PQH9 124 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 GIPC1O14908 333 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 MAPK13O15264 365 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 MAP3K13O43283 966 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 ACO1P21399 889 aaKnown RBP11.77□□□□□ -0.53
TARDBP-221ENST00000619555 ATP5C1P36542 298 aaKnown RBP11.77□□□□□ -0.53
TARDBP-221ENST00000619555 PTGER3P43115 390 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 IRX4P78413 519 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 NFIL3Q16649 462 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 C10orf76Q5T2E6 689 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 GRAMD4Q6IC98 578 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 PSAPL1Q6NUJ1 521 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 TPGS1Q6ZTW0 290 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 FAM186BQ8IYM0 893 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 ZNF513Q8N8E2 541 aaPredicted RBP11.77□□□□□ -0.53
TARDBP-221ENST00000619555 TERB1Q8NA31 727 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 SPATA20Q8TB22 786 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 CCDC47Q96A33 483 aaKnown RBP11.77□□□□□ -0.53
TARDBP-221ENST00000619555 ERLEC1Q96DZ1 483 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 NT5C1AQ9BXI3 368 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 CYP3A43Q9HB55 503 aa11.77□□□□□ -0.53
TARDBP-221ENST00000619555 CYLDQ9NQC7 956 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms