RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 CDO1Q16878 200 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 C15orf59Q2T9L4 293 aaPredicted RBP14.68□□□□□ -0.06
NLE1-205ENST00000588642 LRIT3Q3SXY7 679 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 SLC25A52Q3SY17 297 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 SH3PXD2AQ5TCZ1 1133 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 SYPL2Q5VXT5 272 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 RTL10Q7L3V2 364 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 BEND5Q7L4P6 421 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 ADGRD2Q7Z7M1 963 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 NIPA2Q8N8Q9 360 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 RNF139Q8WU17 664 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 FAM172AQ8WUF8 416 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 PPP2R3CQ969Q6 453 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 NCAPGQ9BPX3 1015 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 NMUR1Q9HB89 426 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 MAN1C1Q9NR34 630 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 RRN3Q9NYV6 651 aa14.68□□□□□ -0.06
NLE1-205ENST00000588642 PACSIN2Q9UNF0 486 aaPredicted RBP14.68□□□□□ -0.06
NLE1-205ENST00000588642 SPDYE4A6NLX3 237 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 MIF4GDA9UHW6 222 aaKnown RBP14.67□□□□□ -0.06
NLE1-205ENST00000588642 CCL16O15467 120 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 ZMYND10O75800 440 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 RALAP11233 206 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 PGFP49763 221 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 PSEN1P49768 467 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 HADHQ16836 314 aaKnown RBP14.67□□□□□ -0.06
NLE1-205ENST00000588642 DAB2IPQ5VWQ8 1189 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 SCYL2Q6P3W7 929 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 RSRC2Q7L4I2 434 aaKnown RBP14.67□□□□□ -0.06
NLE1-205ENST00000588642 UBL4BQ8N7F7 174 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 PDZD8Q8NEN9 1154 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 HDAC7Q8WUI4 952 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 OVCA2Q8WZ82 227 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 PSMG2Q969U7 264 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 TRMT2BQ96GJ1 504 aaKnown RBP14.67□□□□□ -0.06
NLE1-205ENST00000588642 MYRFLQ96LU7 910 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 TBCBQ99426 244 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 TLR10Q9BXR5 811 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 RRAGDQ9NQL2 400 aaPredicted RBP14.67□□□□□ -0.06
NLE1-205ENST00000588642 TRPM5Q9NZQ8 1165 aa14.67□□□□□ -0.06
NLE1-205ENST00000588642 UXTQ9UBK9 157 aaPredicted RBP14.67□□□□□ -0.06
NLE1-205ENST00000588642 PLXNA4Q9HCM2 1894 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 SYNJ2BP-COX16A0A087WUM0 186 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 M0QYT0 321 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 FANCGO15287 622 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 URI1O94763 535 aaPredicted RBP14.66□□□□□ -0.06
NLE1-205ENST00000588642 RARGP13631 454 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 TFE3P19532 575 aaPredicted RBP14.66□□□□□ -0.06
NLE1-205ENST00000588642 MIPP30301 263 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 PCK1P35558 622 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 GJC1P36383 396 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 TAS2R40P59535 323 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 DUSP6Q16828 381 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 ZFYVE27Q5T4F4 411 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 PAPD7Q5XG87 772 aaKnown RBP14.66□□□□□ -0.06
NLE1-205ENST00000588642 RHOT1Q8IXI2 618 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 ARFGAP1Q8N6T3 406 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 ADAM32Q8TC27 787 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 CENPIQ92674 756 aaPredicted RBP14.66□□□□□ -0.06
NLE1-205ENST00000588642 HES6Q96HZ4 224 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 NPY6RQ99463 290 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 IGFLR1Q9H665 355 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 FAM204AQ9H8W3 233 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 OSER1Q9NX31 292 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 CLIC5Q9NZA1 410 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 COX16Q9P0S2 106 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 PCSK1NQ9UHG2 260 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.66□□□□□ -0.06
NLE1-205ENST00000588642 HCFC2Q9Y5Z7 792 aa14.66□□□□□ -0.06
NLE1-205ENST00000588642 NLRC5Q86WI3 1866 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 CCDC66A2RUB6 948 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 KCNK3O14649 394 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 PRPSAP2O60256 369 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 XYLBO75191 536 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 LRCH4O75427 683 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 RFPL2O75678 378 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 TRUB2O95900 331 aaKnown RBP14.65□□□□□ -0.06
NLE1-205ENST00000588642 F9P00740 461 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 HNRNPA1P09651 372 aaKnown RBP eCLIP14.65□□□□□ -0.06
NLE1-205ENST00000588642 ZDHHC11BP0C7U3 371 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 CTNNA2P26232 953 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 GBP1P32455 592 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 PPP3CCP48454 512 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 PITX1P78337 314 aaPredicted RBP14.65□□□□□ -0.06
NLE1-205ENST00000588642 DEUP1Q05D60 604 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 NME3Q13232 169 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 PABPC1LQ4VXU2 614 aaKnown RBP14.65□□□□□ -0.06
NLE1-205ENST00000588642 RAB6CQ53S08 254 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 ZNF697Q5TEC3 545 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 SND1Q7KZF4 910 aaKnown RBP eCLIP14.65□□□□□ -0.06
NLE1-205ENST00000588642 STRADAQ7RTN6 431 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 DQX1Q8TE96 717 aaKnown RBP14.65□□□□□ -0.06
NLE1-205ENST00000588642 KRT35Q92764 455 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 CD101Q93033 1021 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 NT5C3BQ969T7 300 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 PSMB7Q99436 277 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 CDCA3Q99618 268 aaPredicted RBP14.65□□□□□ -0.06
NLE1-205ENST00000588642 CORO1BQ9BR76 489 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 RAB6CQ9H0N0 254 aa14.65□□□□□ -0.06
NLE1-205ENST00000588642 PRDM12Q9H4Q4 367 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms