RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 LRRC53A6NM62 1247 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 YJEFN3A6XGL0 299 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 E5RJQ4 531 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 E7ENQ6 273 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 PI4K2BG5E9Z4 385 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 LSM8O95777 96 aaKnown RBP16.15■□□□□ 0.18
IFT20-206ENST00000578122 CDH5P33151 784 aaPredicted RBP16.15■□□□□ 0.18
IFT20-206ENST00000578122 ATP5C1P36542 298 aaKnown RBP16.15■□□□□ 0.18
IFT20-206ENST00000578122 SNX16P57768 344 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 GPC5P78333 572 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 FMO1Q01740 532 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 ASIC2Q16515 512 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 C10orf120Q5SQS8 335 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 SFMBT2Q5VUG0 894 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 SARM1Q6SZW1 724 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 IRF2BP2Q7Z5L9 587 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 TADA2BQ86TJ2 420 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 SCUBE3Q8IX30 993 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 ZNF276Q8N554 614 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 SH3RF2Q8TEC5 729 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 EDAQ92838 391 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 PPP1R13BQ96KQ4 1090 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 CPXM1Q96SM3 734 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 CDK5RAP1Q96SZ6 601 aaKnown RBP16.15■□□□□ 0.18
IFT20-206ENST00000578122 SMPD4Q9NXE4 827 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.15■□□□□ 0.18
IFT20-206ENST00000578122 CPQQ9Y646 472 aa16.15■□□□□ 0.18
IFT20-206ENST00000578122 KIF26AQ9ULI4 1882 aaPredicted RBP16.14■□□□□ 0.17
IFT20-206ENST00000578122 ZNF263O14978 683 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 SART1O43290 800 aaKnown RBP16.14■□□□□ 0.17
IFT20-206ENST00000578122 TBX18O95935 607 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 TCF3P15923 654 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 GDI1P31150 447 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 USP4Q13107 963 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 BSPRYQ5W0U4 402 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 BTBD8Q5XKL5 378 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 KLHDC10Q6PID8 442 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 TMEM92Q6UXU6 159 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 TRIM72Q6ZMU5 477 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 HFE2Q6ZVN8 426 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 RSRC2Q7L4I2 434 aaKnown RBP16.14■□□□□ 0.17
IFT20-206ENST00000578122 TTC16Q8NEE8 873 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 ZNF397Q8NF99 534 aaPredicted RBP16.14■□□□□ 0.17
IFT20-206ENST00000578122 CLEC4CQ8WTT0 213 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 CPLX3Q8WVH0 158 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 AGPAT1Q99943 283 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 TRIM5Q9C035 493 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 BRD9Q9H8M2 597 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 SLC2A4RGQ9NR83 387 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 THG1LQ9NWX6 298 aaKnown RBP16.14■□□□□ 0.17
IFT20-206ENST00000578122 AIPL1Q9NZN9 384 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 TJP2Q9UDY2 1190 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 DNMT3LQ9UJW3 386 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 NUDT5Q9UKK9 219 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 CAPN11Q9UMQ6 739 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 UNC80Q8N2C7 3258 aa16.14■□□□□ 0.17
IFT20-206ENST00000578122 TICRRQ7Z2Z1 1910 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 LEFTY2O00292 366 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 MDM4O15151 490 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 CHADO15335 359 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 PAPSS1O43252 624 aaPredicted RBP16.13■□□□□ 0.17
IFT20-206ENST00000578122 AP5Z1O43299 807 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 NOMO3P69849 1222 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 ZBED6P86452 979 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 ZXDBP98169 803 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 FCHO2Q0JRZ9 810 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 ZNF77Q15935 545 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 PTPN20Q4JDL3 420 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 ARHGAP29Q52LW3 1261 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 NAA35Q5VZE5 725 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 SPECC1LQ69YQ0 1117 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 CC2D1AQ6P1N0 951 aaPredicted RBP16.13■□□□□ 0.17
IFT20-206ENST00000578122 ERICH1Q86X53 443 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 DDX42Q86XP3 938 aaKnown RBP eCLIP16.13■□□□□ 0.17
IFT20-206ENST00000578122 VSTM4Q8IW00 320 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 RIN3Q8TB24 985 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 IPO4Q8TEX9 1081 aaKnown RBP16.13■□□□□ 0.17
IFT20-206ENST00000578122 CPA5Q8WXQ8 436 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 GOLGA1Q92805 767 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 NUCKS1Q9H1E3 243 aaKnown RBP16.13■□□□□ 0.17
IFT20-206ENST00000578122 EPHX3Q9H6B9 360 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 SYNCQ9H7C4 482 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 ABCC13Q9NSE7 274 aa16.13■□□□□ 0.17
IFT20-206ENST00000578122 LTFP02788 710 aa16.12■□□□□ 0.17
IFT20-206ENST00000578122 ERBB2P04626 1255 aa16.12■□□□□ 0.17
IFT20-206ENST00000578122 CYP1A1P04798 512 aaPredicted RBP16.12■□□□□ 0.17
IFT20-206ENST00000578122 GYPCP04921 128 aa16.12■□□□□ 0.17
IFT20-206ENST00000578122 PFKPQ01813 784 aa16.12■□□□□ 0.17
IFT20-206ENST00000578122 SIGLEC14Q08ET2 396 aa16.12■□□□□ 0.17
IFT20-206ENST00000578122 MTF1Q14872 753 aa16.12■□□□□ 0.17
IFT20-206ENST00000578122 E4F1Q66K89 784 aaPredicted RBP16.12■□□□□ 0.17
IFT20-206ENST00000578122 OR6B2Q6IFH4 312 aa16.12■□□□□ 0.17
IFT20-206ENST00000578122 MSANTD4Q8NCY6 345 aa16.12■□□□□ 0.17
IFT20-206ENST00000578122 RNF139Q8WU17 664 aa16.12■□□□□ 0.17
IFT20-206ENST00000578122 EDEM1Q92611 657 aa16.12■□□□□ 0.17
IFT20-206ENST00000578122 IRF7Q92985 503 aa16.12■□□□□ 0.17
IFT20-206ENST00000578122 ZFRQ96KR1 1074 aaKnown RBP16.12■□□□□ 0.17
IFT20-206ENST00000578122 PCDHB18PQ96TA0 734 aa16.12■□□□□ 0.17
IFT20-206ENST00000578122 KLF16Q9BXK1 252 aaPredicted RBP16.12■□□□□ 0.17
IFT20-206ENST00000578122 GKN1Q9NS71 199 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms