RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 MSL2Q9HCI7 577 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 TMEM140Q9NV12 185 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 HOXC10Q9NYD6 342 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 HMG20BQ9P0W2 317 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 FAM50BQ9Y247 325 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 CNPY2Q9Y2B0 182 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 ATG2AQ2TAZ0 1938 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 ELP1O95163 1332 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 MROH7Q68CQ1 1323 aa6.24□□□□□ -1.41
SF3B3-214ENST00000572365 SIP14410 1827 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 PARP14Q460N5 1801 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 GVINP1Q7Z2Y8 2422 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 KIF28PB7ZC32 967 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 GOLIM4O00461 696 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 PMM2O15305 246 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 DUSP11O75319 330 aaKnown RBP6.23□□□□□ -1.41
SF3B3-214ENST00000572365 LDHCP07864 332 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 FTH1P19P0C7X4 201 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 ALOX15P16050 662 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-214ENST00000572365 MALP21145 153 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 PCSK1P29120 753 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 CASRP41180 1078 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 GJA9P57773 515 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 CTXN1P60606 82 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 DEFB103AP81534 67 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 CALD1Q05682 793 aaKnown RBP6.23□□□□□ -1.41
SF3B3-214ENST00000572365 SP140Q13342 867 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 ACVR2BQ13705 512 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 CNN3Q15417 329 aaKnown RBP6.23□□□□□ -1.41
SF3B3-214ENST00000572365 TCTN1Q2MV58 587 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 RABL6Q3YEC7 729 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-214ENST00000572365 MAEAQ7L5Y9 396 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 HEATR3Q7Z4Q2 680 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 FRMD5Q7Z6J6 570 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 SUGP1Q8IWZ8 645 aaKnown RBP6.23□□□□□ -1.41
SF3B3-214ENST00000572365 ADSSL1Q8N142 457 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 MDM1Q8TC05 714 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 EDAQ92838 391 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 MTFMTQ96DP5 389 aaKnown RBP6.23□□□□□ -1.41
SF3B3-214ENST00000572365 C12orf42Q96LP6 360 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 VRK1Q99986 396 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-214ENST00000572365 CHMP4AQ9BY43 222 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 MROH8Q9H579 483 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 LMBRD1Q9NUN5 540 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 RIPK3Q9Y572 518 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 PCDHA3Q9Y5H8 950 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 ASTN1O14525 1302 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 FLT1P17948 1338 aa6.23□□□□□ -1.41
SF3B3-214ENST00000572365 TEX33O43247 280 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 FRS3O43559 492 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 CNOT4O95628 575 aaKnown RBP6.22□□□□□ -1.41
SF3B3-214ENST00000572365 TYRP14679 529 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 FPR1P21462 350 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 AVPR2P30518 371 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 PTPN7P35236 360 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 KCNC1P48547 511 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 GZMKP49863 264 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 PLCD1P51178 756 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 NEK3P51956 506 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 TFCP2Q12800 502 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 FGL2Q14314 439 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 KCTD2Q14681 263 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 CCDC157Q569K6 752 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 TCEAL5Q5H9L2 206 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 RNF220Q5VTB9 566 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 BORAQ6PGQ7 559 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 ADHFE1Q8IWW8 467 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 MIGA1Q8NAN2 632 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 PCSK9Q8NBP7 692 aaKnown RBP6.22□□□□□ -1.41
SF3B3-214ENST00000572365 OR5M3Q8NGP4 307 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 NEK9Q8TD19 979 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 RMDN1Q96DB5 314 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 IL17RAQ96F46 866 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 SLC35A4Q96G79 324 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 USP44Q9H0E7 712 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 PDGFCQ9NRA1 345 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 MOCS1Q9NZB8 636 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 PUF60Q9UHX1 559 aaKnown RBP6.22□□□□□ -1.41
SF3B3-214ENST00000572365 FOCADQ5VW36 1801 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 ZNF236Q9UL36 1845 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 KIF16BQ96L93 1317 aa6.22□□□□□ -1.41
SF3B3-214ENST00000572365 ADAMTS20P59510 1910 aa6.21□□□□□ -1.41
SF3B3-214ENST00000572365 LINC01553A4QN01 128 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 PRR23AA6NEV1 266 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 NT5C1B-RDH14C9J2C7 533 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 LINC01565O15544 149 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 PEX2P28328 305 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 DEKP35659 375 aaKnown RBP6.21□□□□□ -1.42
SF3B3-214ENST00000572365 NPEPPSP55786 919 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 RAC3P60763 192 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 GSTO1P78417 241 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 CNTN2Q02246 1040 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 APBA1Q02410 837 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 MRPL49Q13405 166 aaKnown RBP6.21□□□□□ -1.42
SF3B3-214ENST00000572365 RIN1Q13671 783 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 BRD3Q15059 726 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 GORABQ5T7V8 394 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 NAA16Q6N069 864 aaPredicted RBP6.21□□□□□ -1.42
SF3B3-214ENST00000572365 CPXCR1Q8N123 301 aa6.21□□□□□ -1.42
SF3B3-214ENST00000572365 KRT78Q8N1N4 520 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms