RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 HSPBP1Q9NZL4 362 aa14.17□□□□□ -0.14
SPG7-207ENST00000563218 TRPM5Q9NZQ8 1165 aa14.17□□□□□ -0.14
SPG7-207ENST00000563218 ATXN2Q99700 1313 aaKnown RBP14.16□□□□□ -0.14
SPG7-207ENST00000563218 FASNP49327 2511 aaKnown RBP14.16□□□□□ -0.14
SPG7-207ENST00000563218 CDX4O14627 284 aaPredicted RBP14.16□□□□□ -0.14
SPG7-207ENST00000563218 KLF8O95600 359 aaPredicted RBP14.16□□□□□ -0.14
SPG7-207ENST00000563218 GNA14O95837 355 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 OLFM2O95897 454 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 ABL1P00519 1130 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 OAS1P00973 400 aaKnown RBP14.16□□□□□ -0.14
SPG7-207ENST00000563218 NR2F2P24468 414 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 TIE1P35590 1138 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 DHPSP49366 369 aaPredicted RBP14.16□□□□□ -0.14
SPG7-207ENST00000563218 COPB1P53618 953 aaKnown RBP14.16□□□□□ -0.14
SPG7-207ENST00000563218 SLC7A9P82251 487 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 FOXC1Q12948 553 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 MYO1EQ12965 1108 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 NR1H3Q13133 447 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 ADAM9Q13443 819 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 DHCR24Q15392 516 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 CRY1Q16526 586 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 NFIL3Q16649 462 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 CCDC40Q4G0X9 1142 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 SH3PXD2AQ5TCZ1 1133 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 VSTM1Q6UX27 236 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 DPH6Q7L8W6 267 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 TRAPPC11Q7Z392 1133 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 CYP2U1Q7Z449 544 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 ZC3H3Q8IXZ2 948 aaKnown RBP14.16□□□□□ -0.14
SPG7-207ENST00000563218 IL17RCQ8NAC3 791 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 RDH13Q8NBN7 331 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 TXNDC5Q8NBS9 432 aaKnown RBP14.16□□□□□ -0.14
SPG7-207ENST00000563218 SPC24Q8NBT2 197 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 WBP2Q969T9 261 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 TRIM44Q96DX7 344 aaPredicted RBP14.16□□□□□ -0.14
SPG7-207ENST00000563218 EEF2KMTQ96G04 330 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 TAB2Q9NYJ8 693 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 CGNQ9P2M7 1197 aaKnown RBP14.16□□□□□ -0.14
SPG7-207ENST00000563218 MBD1Q9UIS9 605 aaPredicted RBP14.16□□□□□ -0.14
SPG7-207ENST00000563218 WASF3Q9UPY6 502 aa14.16□□□□□ -0.14
SPG7-207ENST00000563218 A0A1B0GTH6 734 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 LRRC10BA6NIK2 292 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 ZNF233A6NK53 670 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 TRIM66O15016 1216 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 CLIC2O15247 247 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 TGFB1I1O43294 461 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 ADAM23O75077 832 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 NR3C1P04150 777 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 DLATP10515 647 aaKnown RBP14.15□□□□□ -0.14
SPG7-207ENST00000563218 ANXA13P27216 316 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 SNRPFP62306 86 aaKnown RBP14.15□□□□□ -0.14
SPG7-207ENST00000563218 IRX4P78413 519 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 TAF10Q12962 218 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 DUOXA2Q1HG44 320 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 USP39Q53GS9 565 aaKnown RBP14.15□□□□□ -0.14
SPG7-207ENST00000563218 RHBDF2Q6PJF5 856 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 APTXQ7Z2E3 356 aaKnown RBP14.15□□□□□ -0.14
SPG7-207ENST00000563218 WDR49Q8IV35 697 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 ADGRG2Q8IZP9 1017 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 PHTF2Q8N3S3 785 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 OLIG1Q8TAK6 271 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 ZNF516Q92618 1163 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 PIGKQ92643 395 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 EXOC4Q96A65 974 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 ZFRQ96KR1 1074 aaKnown RBP14.15□□□□□ -0.14
SPG7-207ENST00000563218 FNBP1Q96RU3 617 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 B3GNT5Q9BYG0 378 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 VPS16Q9H269 839 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 FSCN3Q9NQT6 498 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 CFAP97Q9P2B7 532 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 CACNA1EQ15878 2313 aa14.15□□□□□ -0.14
SPG7-207ENST00000563218 TMEM131Q92545 1883 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 PES1O00541 588 aaKnown RBP14.14□□□□□ -0.15
SPG7-207ENST00000563218 MBL2P11226 248 aaPredicted RBP14.14□□□□□ -0.15
SPG7-207ENST00000563218 PRKCSHP14314 528 aaPredicted RBP14.14□□□□□ -0.15
SPG7-207ENST00000563218 HOXB3P14651 431 aaPredicted RBP14.14□□□□□ -0.15
SPG7-207ENST00000563218 CYP2J2P51589 502 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 NOP14P78316 857 aaKnown RBP14.14□□□□□ -0.15
SPG7-207ENST00000563218 NR1I3Q14994 352 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 SNRNP35Q16560 246 aaKnown RBP14.14□□□□□ -0.15
SPG7-207ENST00000563218 UAP1L1Q3KQV9 507 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 TMEFF1Q8IYR6 380 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 OR6B3Q8NGW1 331 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 PLEKHO2Q8TD55 490 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 COL26A1Q96A83 441 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 ERLEC1Q96DZ1 483 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 C8orf48Q96LL4 319 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 TUBGCP2Q9BSJ2 902 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 TMEM121BQ9BXQ6 578 aaPredicted RBP14.14□□□□□ -0.15
SPG7-207ENST00000563218 TMEM9BQ9NQ34 198 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 RTN4Q9NQC3 1192 aaKnown RBP14.14□□□□□ -0.15
SPG7-207ENST00000563218 AGPAT3Q9NRZ7 376 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 TMEM74BQ9NUR3 256 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 PTPRBP23467 1997 aa14.14□□□□□ -0.15
SPG7-207ENST00000563218 PLXNB3Q9ULL4 1909 aa14.13□□□□□ -0.15
SPG7-207ENST00000563218 KHNYNO15037 678 aaKnown RBP14.13□□□□□ -0.15
SPG7-207ENST00000563218 TRIM24O15164 1050 aa14.13□□□□□ -0.15
SPG7-207ENST00000563218 SLC16A3O15427 465 aaKnown RBP14.13□□□□□ -0.15
SPG7-207ENST00000563218 KAT7O95251 611 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms