RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 TFF2Q03403 129 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 LMAN2Q12907 356 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 SLC35G1Q2M3R5 365 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.58□□□□□ -1.52
USP8-218ENST00000561330 PRAMEF17Q5VTA0 474 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 FBXO38Q6PIJ6 1188 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 SERPINA13PQ6UXR4 307 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 KIAA0408Q6ZU52 694 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 ZNF575Q86XF7 245 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 CCDC28AQ8IWP9 274 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 SEMA6DQ8NFY4 1073 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 DEPTORQ8TB45 409 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 ABHD5Q8WTS1 349 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 GJA10Q969M2 543 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 MMS19Q96T76 1030 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 PCDHAC1Q9H158 963 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 CHST12Q9NRB3 414 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 FNIP2Q9P278 1114 aa5.58□□□□□ -1.52
USP8-218ENST00000561330 ZMYND8Q9ULU4 1186 aaPredicted RBP5.58□□□□□ -1.52
USP8-218ENST00000561330 LINC01548A6NM66 108 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 HNRNPDLO14979 420 aaKnown RBP5.57□□□□□ -1.52
USP8-218ENST00000561330 WDR47O94967 919 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 NHLRC4P0CG21 123 aaPredicted RBP5.57□□□□□ -1.52
USP8-218ENST00000561330 TMEM225BP0DP42 221 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 FBLP22087 321 aaKnown RBP5.57□□□□□ -1.52
USP8-218ENST00000561330 ADRA1DP25100 572 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 SLC5A2P31639 672 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 MCM5P33992 734 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 HTR7P34969 479 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 C21orf58P58505 322 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 TUBA4AP68366 448 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 BTKQ06187 659 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 SLC10A2Q12908 348 aaPredicted RBP5.57□□□□□ -1.52
USP8-218ENST00000561330 PROSER3Q2NL68 480 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 TMEM63BQ5T3F8 832 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 SYCP2LQ5T4T6 812 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 ABLIM2Q6H8Q1 611 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 BCDIN3DQ7Z5W3 292 aaKnown RBP5.57□□□□□ -1.52
USP8-218ENST00000561330 PNLDC1Q8NA58 520 aaKnown RBP5.57□□□□□ -1.52
USP8-218ENST00000561330 SGCZQ96LD1 299 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 FYTTD1Q96QD9 318 aaKnown RBP5.57□□□□□ -1.52
USP8-218ENST00000561330 GDF15Q99988 308 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.57□□□□□ -1.52
USP8-218ENST00000561330 ZNF700Q9H0M5 742 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 NLRC4Q9NPP4 1024 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 RGL1Q9NZL6 768 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 PCDHGB2Q9Y5G2 931 aa5.57□□□□□ -1.52
USP8-218ENST00000561330 CCDC194A0A1B0GVG4 234 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 FAM234BA2RU67 622 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 TISP43B9A030 160 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 UBE2Q2LH0YL09 131 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 PODXLO00592 558 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 GCATO75600 419 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 MT-CO3P00414 261 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 ARP10275 920 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 MST1P26927 711 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 HSPA7P48741 367 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 GRM1Q13255 1194 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 ACOX1Q15067 660 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 C4orf46Q504U0 113 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 DGKKQ5KSL6 1271 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 RAP1GAP2Q684P5 730 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 P3H2Q8IVL5 708 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 PNPLA1Q8N8W4 532 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 GLIS1Q8NBF1 620 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 SUN3Q8TAQ9 357 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 ADAMTS18Q8TE60 1221 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 DPF1Q92782 380 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 KIAA1191Q96A73 305 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 CCDC17Q96LX7 622 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 FER1L4A9Z1Z3 1794 aa5.56□□□□□ -1.52
USP8-218ENST00000561330 PRRT4C9JH25 899 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 POC1B-GALNT4F8VUJ3 575 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 APEHP13798 732 aaKnown RBP5.55□□□□□ -1.52
USP8-218ENST00000561330 EGR1P18146 543 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 DGKQP52824 942 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 MRPS21P82921 87 aaKnown RBP5.55□□□□□ -1.52
USP8-218ENST00000561330 DEUP1Q05D60 604 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 MTAPQ13126 283 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 FHL3Q13643 280 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 MAPKAPK3Q16644 382 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 FAM187BQ17R55 369 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 CCDC142Q17RM4 750 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 MPEG1Q2M385 716 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 SLC5A9Q2M3M2 681 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 CERKLQ49MI3 558 aaPredicted RBP5.55□□□□□ -1.52
USP8-218ENST00000561330 ZNF782Q6ZMW2 699 aaPredicted RBP5.55□□□□□ -1.52
USP8-218ENST00000561330 CHSY1Q86X52 802 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 GALNT4Q8N4A0 578 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 C12orf76Q8N812 135 aaPredicted RBP5.55□□□□□ -1.52
USP8-218ENST00000561330 GRAMD1AQ96CP6 724 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 RITA1Q96K30 269 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 ASB2Q96Q27 587 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 ARFGAP3Q9NP61 516 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 ADARB2Q9NS39 739 aaKnown RBP5.55□□□□□ -1.52
USP8-218ENST00000561330 ASIC5Q9NY37 505 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 ASAP1Q9ULH1 1129 aa5.55□□□□□ -1.52
USP8-218ENST00000561330 TCRBV5S1A1TA0A578 114 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 WIPF3A6NGB9 483 aa5.54□□□□□ -1.52
USP8-218ENST00000561330 BTBD19C9JJ37 291 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms