RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 CLIC5Q9NZA1 410 aa16.29■□□□□ 0.2
RABGGTA-219ENST00000560871 MTF2Q9Y483 593 aaPredicted RBP16.29■□□□□ 0.2
RABGGTA-219ENST00000560871 A0A1W2PQC6 194 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 GOLGA6L19H0YKK7 550 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 ZNF263O14978 683 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 CD72P21854 359 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 PDCLQ13371 301 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 FILIP1LQ4L180 1135 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 ARHGAP29Q52LW3 1261 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 TPRG1Q6ZUI0 275 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 SIX6OS1Q8N1H7 587 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 WDTC1Q8N5D0 677 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 STK32AQ8WU08 396 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 ZFYVE19Q96K21 471 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 PCMTD1Q96MG8 357 aaPredicted RBP16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 NELL2Q99435 816 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 FAM83CQ9BQN1 747 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 LHX5Q9H2C1 402 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 NAGPAQ9UK23 515 aa16.28■□□□□ 0.2
RABGGTA-219ENST00000560871 FAM170BA6NMN3 283 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 LEFTY2O00292 366 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 TBX18O95935 607 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 SERPINC1P01008 464 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 MBL2P11226 248 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 RARGP13631 454 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 LCP1P13796 627 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 SOX5P35711 763 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 PBX1P40424 430 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 BPIFB4P59827 614 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 YWHAGP61981 247 aaKnown RBP eCLIP16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 PLCB2Q00722 1185 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 UBXN2BQ14CS0 331 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 KLHDC10Q6PID8 442 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 NOP9Q86U38 636 aaKnown RBP16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 PASD1Q8IV76 773 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 YAF2Q8IY57 180 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 ARHGAP18Q8N392 663 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 CLEC4CQ8WTT0 213 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 NDRG1Q92597 394 aaKnown RBP16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 SPAG5Q96R06 1193 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 SLC4A5Q9BY07 1137 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 TTYH3Q9C0H2 523 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 HPS4Q9NQG7 708 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 SMPD4Q9NXE4 827 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 NOCTQ9UK39 431 aaKnown RBP16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 FANCMQ8IYD8 2048 aa16.27■□□□□ 0.2
RABGGTA-219ENST00000560871 YJEFN3A6XGL0 299 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 E7ENQ6 273 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 PIK3R2O00459 728 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 GFPT2O94808 682 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 TARSP26639 723 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 CDH5P33151 784 aaPredicted RBP16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 FZD5Q13467 585 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 TRIM68Q6AZZ1 485 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 ZNF852Q6ZMS4 543 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 TMEM110Q86TL2 294 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 C1orf210Q8IVY1 113 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 KIAA1958Q8N8K9 716 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 C1orf131Q8NDD1 294 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 OSCP1Q8WVF1 389 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 IRGQQ8WZA9 623 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 BAP1Q92560 729 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 CLDN23Q96B33 292 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 TJP2Q9UDY2 1190 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 NUDT5Q9UKK9 219 aa16.26■□□□□ 0.19
RABGGTA-219ENST00000560871 E5RJQ4 531 aa16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 MAN2B1O00754 1011 aa16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 MDM4O15151 490 aa16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 PAPSS1O43252 624 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 FBXO21O94952 628 aa16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 ATP5C1P36542 298 aaKnown RBP16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 STAT1P42224 750 aa16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 MAGEA9P43362 315 aa16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 ACADSBP45954 432 aa16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 MLLT6P55198 1093 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 DDX42Q86XP3 938 aaKnown RBP eCLIP16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 ZNF677Q86XU0 584 aa16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 ZNF687Q8N1G0 1237 aa16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 WBP2Q969T9 261 aa16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 CPXM1Q96SM3 734 aa16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 CDK5RAP1Q96SZ6 601 aaKnown RBP16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 KLF16Q9BXK1 252 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 ST7Q9NRC1 585 aa16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 THG1LQ9NWX6 298 aaKnown RBP16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 MRPS17Q9Y2R5 130 aaKnown RBP16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 WNT6Q9Y6F9 365 aa16.25■□□□□ 0.19
RABGGTA-219ENST00000560871 NCAM2O15394 837 aa16.24■□□□□ 0.19
RABGGTA-219ENST00000560871 GREM1O60565 184 aa16.24■□□□□ 0.19
RABGGTA-219ENST00000560871 GFRA3O60609 400 aa16.24■□□□□ 0.19
RABGGTA-219ENST00000560871 MMEP08473 750 aa16.24■□□□□ 0.19
RABGGTA-219ENST00000560871 RALAP11233 206 aa16.24■□□□□ 0.19
RABGGTA-219ENST00000560871 KRT9P35527 623 aa16.24■□□□□ 0.19
RABGGTA-219ENST00000560871 RPS9P46781 194 aaKnown RBP16.24■□□□□ 0.19
RABGGTA-219ENST00000560871 UBASH3AP57075 661 aa16.24■□□□□ 0.19
RABGGTA-219ENST00000560871 TNK2Q07912 1038 aa16.24■□□□□ 0.19
RABGGTA-219ENST00000560871 PDGFRLQ15198 375 aa16.24■□□□□ 0.19
RABGGTA-219ENST00000560871 EML3Q32P44 896 aa16.24■□□□□ 0.19
RABGGTA-219ENST00000560871 PTPN20Q4JDL3 420 aa16.24■□□□□ 0.19
RABGGTA-219ENST00000560871 FIGNQ5HY92 759 aa16.24■□□□□ 0.19
RABGGTA-219ENST00000560871 TAF3Q5VWG9 929 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms