RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 NOX5Q96PH1 765 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 AGPAT1Q99943 283 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 KLF16Q9BXK1 252 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 KIF9Q9HAQ2 790 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 SMPD4Q9NXE4 827 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 CEP83Q9Y592 693 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 FAM170AA1A519 330 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 ARNTLO00327 626 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 ZNF263O14978 683 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 MDM4O15151 490 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 CHADO15335 359 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 ERBB2P04626 1255 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 FYNP06241 537 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 UNGP13051 313 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 GABRB2P47870 512 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 NOMO3P69849 1222 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 ZBED6P86452 979 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 IER5LQ5T953 404 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 NAA35Q5VZE5 725 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 SPECC1LQ69YQ0 1117 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 TRIM67Q6ZTA4 783 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 ERICH1Q86X53 443 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 FMNL3Q8IVF7 1028 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 YAF2Q8IY57 180 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 TTC16Q8NEE8 873 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 OLIG1Q8TAK6 271 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 EDEM1Q92611 657 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 WBP2Q969T9 261 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 IQCDQ96DY2 449 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 ZFYVE19Q96K21 471 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 FAM83CQ9BQN1 747 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 SYT11Q9BT88 431 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 TRIM5Q9C035 493 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 NACA2Q9H009 215 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 LINC00597Q9H2U6 94 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 BRD9Q9H8M2 597 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 ABCC13Q9NSE7 274 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 THG1LQ9NWX6 298 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 WNT16Q9UBV4 365 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 DNMT3LQ9UJW3 386 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 LUC7L2Q9Y383 392 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 MYO16Q9Y6X6 1858 aa12.52□□□□□ -0.41
RABGGTA-218ENST00000560777 GREM1O60565 184 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 LTFP02788 710 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 SKILP12757 684 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 CASP14P31944 242 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 PRKCIP41743 596 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 SNX16P57768 344 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 SIGLEC14Q08ET2 396 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 EFEMP1Q12805 493 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 USP4Q13107 963 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 MTF1Q14872 753 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 TAF5Q15542 800 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 ASIC2Q16515 512 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 ARHGAP29Q52LW3 1261 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 TRIM72Q6ZMU5 477 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 FAM183BPQ6ZVS7 135 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 TADA2BQ86TJ2 420 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 ZNF397Q8NF99 534 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 SLC30A5Q8TAD4 765 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 SYN2Q92777 582 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 IRF7Q92985 503 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 C18orf8Q96DM3 657 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 ASIC4Q96FT7 647 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 PIWIL1Q96J94 861 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 NUCKS1Q9H1E3 243 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 HAUS4Q9H6D7 363 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 TRPV5Q9NQA5 729 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 CFAP97Q9P2B7 532 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 NAALADL1Q9UQQ1 740 aa12.51□□□□□ -0.41
RABGGTA-218ENST00000560777 CUL9Q8IWT3 2517 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 SART1O43290 800 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 TNFAIP3P21580 790 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 MMP8P22894 467 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 YWHAZP63104 245 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 PFKPQ01813 784 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 SLC6A3Q01959 620 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 TNK2Q07912 1038 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 KLHL30Q0D2K2 578 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 CLEC16AQ2KHT3 1053 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 SLC44A4Q53GD3 710 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 C2CD6Q53TS8 623 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 EFHC1Q5JVL4 640 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 SYPL2Q5VXT5 272 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 HGSNATQ68CP4 663 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 TRIM68Q6AZZ1 485 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 OR6B2Q6IFH4 312 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 CC2D1AQ6P1N0 951 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 OLFML1Q6UWY5 402 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 RSRC2Q7L4I2 434 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 BEND5Q7L4P6 421 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 ZNF571Q7Z3V5 609 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 DDX42Q86XP3 938 aaKnown RBP eCLIP12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 MIB1Q86YT6 1006 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 ADGRG2Q8IZP9 1017 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 KIAA1958Q8N8K9 716 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 RNF139Q8WU17 664 aa12.5□□□□□ -0.41
RABGGTA-218ENST00000560777 OSCP1Q8WVF1 389 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms