RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 SLC25A11Q02978 314 aaKnown RBP16.68■□□□□ 0.26
XRCC1-202ENST00000543982 TWF1Q12792 350 aa16.68■□□□□ 0.26
XRCC1-202ENST00000543982 TAF10Q12962 218 aa16.68■□□□□ 0.26
XRCC1-202ENST00000543982 PIGHQ14442 188 aaPredicted RBP16.68■□□□□ 0.26
XRCC1-202ENST00000543982 NAA30Q147X3 362 aaPredicted RBP16.68■□□□□ 0.26
XRCC1-202ENST00000543982 PPP2R2DQ66LE6 453 aa16.68■□□□□ 0.26
XRCC1-202ENST00000543982 ARCQ7LC44 396 aa16.68■□□□□ 0.26
XRCC1-202ENST00000543982 TCEAL8Q8IYN2 117 aa16.68■□□□□ 0.26
XRCC1-202ENST00000543982 SCML4Q8N228 414 aa16.68■□□□□ 0.26
XRCC1-202ENST00000543982 UBXN4Q92575 508 aa16.68■□□□□ 0.26
XRCC1-202ENST00000543982 CENPIQ92674 756 aaPredicted RBP16.68■□□□□ 0.26
XRCC1-202ENST00000543982 NT5C3BQ969T7 300 aa16.68■□□□□ 0.26
XRCC1-202ENST00000543982 POPDC2Q9HBU9 364 aa16.68■□□□□ 0.26
XRCC1-202ENST00000543982 TMPRSS4Q9NRS4 437 aa16.68■□□□□ 0.26
XRCC1-202ENST00000543982 PCSK1NQ9UHG2 260 aa16.68■□□□□ 0.26
XRCC1-202ENST00000543982 MAGED2Q9UNF1 606 aaPredicted RBP16.68■□□□□ 0.26
XRCC1-202ENST00000543982 PCDHA3Q9Y5H8 950 aa16.68■□□□□ 0.26
XRCC1-202ENST00000543982 TRANK1O15050 2925 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 CTAGE15A4D2H0 777 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 KCNK3O14649 394 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 CTAGE8P0CG41 777 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 MAN1A1P33908 653 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 CTNNA1P35221 906 aaKnown RBP16.67■□□□□ 0.26
XRCC1-202ENST00000543982 GJC1P36383 396 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 SLC1A1P43005 524 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 SSR1P43307 286 aaKnown RBP16.67■□□□□ 0.26
XRCC1-202ENST00000543982 TUFMP49411 452 aaKnown RBP16.67■□□□□ 0.26
XRCC1-202ENST00000543982 YWHAGP61981 247 aaKnown RBP eCLIP16.67■□□□□ 0.26
XRCC1-202ENST00000543982 RPL10AP62906 217 aaKnown RBP16.67■□□□□ 0.26
XRCC1-202ENST00000543982 TUBB4BP68371 445 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 UBE3AQ05086 875 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 CKAP4Q07065 602 aaKnown RBP16.67■□□□□ 0.26
XRCC1-202ENST00000543982 SMC1AQ14683 1233 aaKnown RBP16.67■□□□□ 0.26
XRCC1-202ENST00000543982 ERCC6LQ2NKX8 1250 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 BNIPLQ7Z465 357 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 CTAGE6Q86UF2 777 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 CTAGE4Q8IX94 777 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 FAM172AQ8WUF8 416 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 CAPZA3Q96KX2 299 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 NPY6RQ99463 290 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 ASNSD1Q9NWL6 643 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 STK39Q9UEW8 545 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.67■□□□□ 0.26
XRCC1-202ENST00000543982 MSRAQ9UJ68 235 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 INSL5Q9Y5Q6 135 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 V9GYY5 206 aaPredicted RBP16.67■□□□□ 0.26
XRCC1-202ENST00000543982 PDE4DIPQ5VU43 2346 aa16.67■□□□□ 0.26
XRCC1-202ENST00000543982 PRRG1O14668 218 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 PYGMP11217 842 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 NCAM1P13591 858 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 CTNNA2P26232 953 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 YWHAQP27348 245 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 SDC4P31431 198 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 CLCN4P51793 760 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 SMTNL2Q2TAL5 461 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 KCNT1Q5JUK3 1230 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 RSRC2Q7L4I2 434 aaKnown RBP16.66■□□□□ 0.26
XRCC1-202ENST00000543982 RBM23Q86U06 439 aaKnown RBP16.66■□□□□ 0.26
XRCC1-202ENST00000543982 SLC7A14Q8TBB6 771 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 IRGQQ8WZA9 623 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 RPGRIP1Q96KN7 1286 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 HERPUD2Q9BSE4 406 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 NGRNQ9NPE2 291 aaKnown RBP16.66■□□□□ 0.26
XRCC1-202ENST00000543982 ANLNQ9NQW6 1124 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 RNF14Q9UBS8 474 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 SYNJ2BP-COX16A0A087WUM0 186 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 I6L893 689 aaPredicted RBP16.66■□□□□ 0.26
XRCC1-202ENST00000543982 LPXNO60711 386 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 CLASP2O75122 1294 aaKnown RBP16.66■□□□□ 0.26
XRCC1-202ENST00000543982 TBX18O95935 607 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 GLI1P08151 1106 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 PTPN9P43378 593 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 SLC22A17Q8WUG5 538 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 UBE2Q2Q8WVN8 375 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 GOLGA1Q92805 767 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 FBXO32Q969P5 355 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 ZWILCHQ9H900 591 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 ZNF334Q9HCZ1 680 aaPredicted RBP16.66■□□□□ 0.26
XRCC1-202ENST00000543982 GPATCH2LQ9NWQ4 482 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 COX16Q9P0S2 106 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 FBXW11Q9UKB1 542 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 SSX2IPQ9Y2D8 614 aa16.66■□□□□ 0.26
XRCC1-202ENST00000543982 PI4K2BG5E9Z4 385 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 CES2O00748 559 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 TRUB2O95900 331 aaKnown RBP16.65■□□□□ 0.26
XRCC1-202ENST00000543982 ADH1AP07327 375 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 EPCAMP16422 314 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 NOS2P35228 1153 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 SULT1E1P49888 294 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 SLC25A52Q3SY17 297 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 KREMEN2Q8NCW0 462 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.65■□□□□ 0.26
XRCC1-202ENST00000543982 RAPGEF5Q92565 580 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 SAMD11Q96NU1 681 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 TTLL2Q9BWV7 592 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 EMILIN2Q9BXX0 1053 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 SLC28A3Q9HAS3 691 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 PIGVQ9NUD9 493 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 HSFX1Q9UBD0 423 aa16.65■□□□□ 0.26
XRCC1-202ENST00000543982 MDM4O15151 490 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms