RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ATXN2Q99700 1313 aaKnown RBP12.58□□□□□ -0.4
GABPB1-206ENST00000543881 FAM221BA6H8Z2 402 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 SGK1O00141 431 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 BEST1O76090 585 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 ASS1P00966 412 aaKnown RBP12.57□□□□□ -0.4
GABPB1-206ENST00000543881 CYP17A1P05093 508 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 ITPKAP23677 461 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 YWHAQP27348 245 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 TIE1P35590 1138 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 DPP6P42658 865 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 PDE6CP51160 858 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 ATXN3P54252 364 aaPredicted RBP12.57□□□□□ -0.4
GABPB1-206ENST00000543881 SGSM1Q2NKQ1 1148 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 MAP7D1Q3KQU3 841 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 SPDYCQ5MJ68 293 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 KRBA2Q6ZNG9 492 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 PROSER1Q86XN7 944 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 HDDC3Q8N4P3 179 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 IL17RCQ8NAC3 791 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 HMGB4Q8WW32 186 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 SLITRK1Q96PX8 696 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 MED10Q9BTT4 135 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 GTPBP2Q9BX10 602 aaKnown RBP12.57□□□□□ -0.4
GABPB1-206ENST00000543881 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.57□□□□□ -0.44e-7■■■■■ 57.7
GABPB1-206ENST00000543881 IL37Q9NZH6 218 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 CHORDC1Q9UHD1 332 aaPredicted RBP12.57□□□□□ -0.4
GABPB1-206ENST00000543881 PILRBQ9UKJ0 227 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 CEP192Q8TEP8 1941 aa12.57□□□□□ -0.4
GABPB1-206ENST00000543881 A0A1W2PQ27 194 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 A0A1W2PQ64 194 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 A0A1W2PQD8 194 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 IKBKBO14920 756 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 CALUO43852 315 aaPredicted RBP12.56□□□□□ -0.4
GABPB1-206ENST00000543881 CLSTN1O94985 981 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 HLA-DRAP01903 254 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 CAPNS1P04632 268 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 TRIM49P0CI25 452 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 TRIM49CP0CI26 452 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 CHRM1P11229 460 aaPredicted RBP12.56□□□□□ -0.4
GABPB1-206ENST00000543881 CCDC130P13994 396 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 ASPAP45381 313 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 SLC6A11P48066 632 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 PGFP49763 221 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 VAMP7P51809 220 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 NDST1P52848 882 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 SLC5A3P53794 718 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 FAM193AP78312 1265 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 C1QBPQ07021 282 aaKnown RBP12.56□□□□□ -0.4
GABPB1-206ENST00000543881 PPP3CAQ08209 521 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 MESP2Q0VG99 397 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 BYSLQ13895 437 aaKnown RBP12.56□□□□□ -0.4
GABPB1-206ENST00000543881 NFIL3Q16649 462 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 HSF5Q4G112 596 aaPredicted RBP12.56□□□□□ -0.4
GABPB1-206ENST00000543881 EOGTQ5NDL2 527 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 EMC10Q5UCC4 262 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 PEAR1Q5VY43 1037 aaPredicted RBP12.56□□□□□ -0.4
GABPB1-206ENST00000543881 FILIP1Q7Z7B0 1213 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 ADGRG2Q8IZP9 1017 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 CRYBG2Q8N1P7 616 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 PGBD3Q8N328 593 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 FBXO32Q969P5 355 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 TNIP3Q96KP6 325 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 ZFRQ96KR1 1074 aaKnown RBP12.56□□□□□ -0.4
GABPB1-206ENST00000543881 PNKPQ96T60 521 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 SMOQ99835 787 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 SCAND2PQ9GZW5 306 aaPredicted RBP12.56□□□□□ -0.4
GABPB1-206ENST00000543881 APOBEC3GQ9HC16 384 aaKnown RBP12.56□□□□□ -0.4
GABPB1-206ENST00000543881 SLC6A14Q9UN76 642 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 FRMD4BQ9Y2L6 1034 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 MYOFQ9NZM1 2061 aa12.56□□□□□ -0.4
GABPB1-206ENST00000543881 FREM2Q5SZK8 3169 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 FAM92AA1XBS5 289 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 MAPK13O15264 365 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 COCHO43405 550 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 OPHN1O60890 802 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 AP1G2O75843 785 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 ZNF202O95125 648 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 RTN3O95197 1032 aaPredicted RBP12.55□□□□□ -0.4
GABPB1-206ENST00000543881 KAT7O95251 611 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 APODP05090 189 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 NR2F2P24468 414 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 HOXD12P35452 270 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 EIF2DP41214 584 aaKnown RBP12.55□□□□□ -0.4
GABPB1-206ENST00000543881 PIK3CAP42336 1068 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 KIR2DL1P43626 348 aaPredicted RBP12.55□□□□□ -0.4
GABPB1-206ENST00000543881 GFPT1Q06210 699 aaPredicted RBP12.55□□□□□ -0.4
GABPB1-206ENST00000543881 DHCR24Q15392 516 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 DUOXA1Q1HG43 343 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 ZCWPW2Q504Y3 356 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 C19orf48Q6RUI8 117 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 GUF1Q8N442 669 aaKnown RBP12.55□□□□□ -0.4
GABPB1-206ENST00000543881 C12orf29Q8N999 325 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 CEP76Q8TAP6 659 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 SLC2A14Q8TDB8 520 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 TAS1R2Q8TE23 839 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 TAF4BQ92750 862 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 SMARCD1Q96GM5 515 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 TWNKQ96RR1 684 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 CCSER2Q9H7U1 834 aa12.55□□□□□ -0.4
GABPB1-206ENST00000543881 CSNK1G1Q9HCP0 422 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms