RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 PER3P56645 1201 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 CYP4F8P98187 520 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 CREMQ03060 361 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 GABPAQ06546 454 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 FCHO2Q0JRZ9 810 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 PSMD2Q13200 908 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 DNAJC3Q13217 504 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 STXBP2Q15833 593 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 ATP2B3Q16720 1220 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 ITPRIPL2Q3MIP1 535 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 LACTB2Q53H82 288 aaPredicted RBP2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 GPR158Q5T848 1215 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 CCDC30Q5VVM6 783 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 KCNV1Q6PIU1 500 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 RNF207Q6ZRF8 634 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 RTL10Q7L3V2 364 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 TMC6Q7Z403 805 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 XYLT1Q86Y38 959 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 NME8Q8N427 588 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 ARL14Q8N4G2 192 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 PPM1NQ8N819 430 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 RNF169Q8NCN4 708 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 CHURC1Q8WUH1 139 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 CNDP2Q96KP4 475 aaKnown RBP2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 KREMEN1Q96MU8 473 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 MTMR9Q96QG7 549 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 CDK5RAP1Q96SZ6 601 aaKnown RBP2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 SMR3AQ99954 134 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 PDCD2LQ9BRP1 358 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 VN1R3Q9BXE9 311 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 SLC29A3Q9BZD2 475 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 PLA2G12AQ9BZM1 189 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 RNF38Q9H0F5 515 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 PNNQ9H307 717 aaKnown RBP2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 CNTD2Q9H8S5 307 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 MLXIPQ9HAP2 919 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 SP110Q9HB58 689 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 TRPV4Q9HBA0 871 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 CHST11Q9NPF2 352 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 RNF19AQ9NV58 838 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 HCFC1R1Q9NWW0 138 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 FNIP2Q9P278 1114 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 BCCIPQ9P287 314 aaKnown RBP eCLIP2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 SWAP70Q9UH65 585 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 TUBE1Q9UJT0 475 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 ADAM21Q9UKJ8 722 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 TCFL5Q9UL49 500 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 ST3GAL5Q9UNP4 418 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 NEU2Q9Y3R4 380 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 SUPT16HQ9Y5B9 1047 aaKnown RBP2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 PCDHB1Q9Y5F3 818 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 MRVI1Q9Y6F6 885 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 TENM1Q9UKZ4 2725 aa2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 ZNF469Q96JG9 3925 aaPredicted RBP2.48□□□□□ -2.01
TRAV1-1-201ENST00000542354 KAT6AQ92794 2004 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 NFASCO94856 1347 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 ABCB11O95342 1321 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 KDM3AQ9Y4C1 1321 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 POLEQ07864 2286 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 WDR27A2RRH5 827 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 TCP11X1B4DZS4 312 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 NOP56O00567 594 aaKnown RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 DFNA5O60443 496 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 BUB1BO60566 1050 aaPredicted RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 EIF3JO75822 258 aaKnown RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 NDUFB10O96000 172 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 LGALS2P05162 132 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 SNRPB2P08579 225 aaKnown RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 KRT19P08727 400 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 AKR1B1P15121 316 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 CEBPBP17676 345 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 GNA15P30679 374 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 CCNFP41002 786 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 MAPKAPK2P49137 400 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 SLC11A1P49279 550 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 ACADVLP49748 655 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 KRTAP10-9P60411 292 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 CYP4F2P78329 520 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 DSG1Q02413 1049 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 IKQ13123 557 aaPredicted RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 MRPL49Q13405 166 aaKnown RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 SEPT6Q14141 434 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 PDCD2Q16342 344 aaPredicted RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 CRY1Q16526 586 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 VWA2Q5GFL6 755 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 CLLU1OSQ5K130 101 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 MANEAQ5SRI9 462 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 CELF3Q5SZQ8 465 aaKnown RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 PODNL1Q6PEZ8 512 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 C14orf80Q86SX3 495 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 FAM160B2Q86V87 743 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 ECHDC2Q86YB7 292 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 JAMLQ86YT9 394 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 SLC41A1Q8IVJ1 513 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 GPR65Q8IYL9 337 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 GMCL1P1Q8NEA9 526 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 ZBTB10Q96DT7 871 aa2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 ZNF419Q96HQ0 510 aaPredicted RBP2.47□□□□□ -2.01
TRAV1-1-201ENST00000542354 C18orf12Q96KH6 178 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms