RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SERPINB2P05120 415 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 PDCP20941 246 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 COMPP49747 757 aaPredicted RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 TAF6P49848 677 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 SLC12A2P55011 1212 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 ADKP55263 362 aaKnown RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 WNT3P56703 355 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 SOX8P57073 446 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 POU3F1Q03052 451 aaPredicted RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 MLC1Q15049 377 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 IZUMO4Q1ZYL8 232 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 INAVAQ3KP66 663 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 ZIK1Q3SY52 487 aaPredicted RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 INO80DQ53TQ3 878 aaPredicted RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 KHDC1LQ5JSQ8 128 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 CERCAMQ5T4B2 595 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 SPSB3Q6PJ21 355 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 RTL10Q7L3V2 364 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 SKAP1Q86WV1 359 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 SPARTQ8N0X7 666 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 MIER2Q8N344 545 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 CNTD1Q8N815 330 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 FAM71DQ8N9W8 422 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 ATL2Q8NHH9 583 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 TMEM171Q8WVE6 324 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 HIC2Q96JB3 615 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 DRC1Q96MC2 740 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 INPP4AQ96PE3 977 aaPredicted RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 SEZ6LQ9BYH1 1024 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 TM6SF1Q9BZW5 370 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 NUAK2Q9H093 628 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 PUS7LQ9H0K6 701 aaKnown RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 SLKQ9H2G2 1235 aaPredicted RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 CDCP1Q9H5V8 836 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 SARS2Q9NP81 518 aaKnown RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 PAPOLBQ9NRJ5 636 aaKnown RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 LMBRD1Q9NUN5 540 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 MSRB1Q9NZV6 116 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 NKX1-2Q9UD57 310 aaPredicted RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 SERPINB13Q9UIV8 391 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 PCDHGA9Q9Y5G4 932 aaKnown RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 PCDHGA8Q9Y5G5 932 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 PCDHGA7Q9Y5G6 932 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 PCDHGA6Q9Y5G7 932 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 PCDHGA3Q9Y5H0 932 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 FER1L4A9Z1Z3 1794 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 TRBV5-3A0A0A0MS03 114 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 A0A0B4J293 547 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 RPS10-NUDT3A0A1W2PQS6 291 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 DENND3A2RUS2 1198 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 BTBD18B2RXH4 712 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 F8W810 466 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 H0YGN5 161 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 ENPP3O14638 875 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 SPRY2O43597 315 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 UGDHO60701 494 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 ATG13O75143 517 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 DDNO94850 711 aaPredicted RBP1.07□□□□□ -2.24
COPB1-212ENST00000534771 UMODP07911 640 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 CD19P15391 556 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 EPHA3P29320 983 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 CNGA1P29973 690 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 MASP1P48740 699 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 SLC11A2P49281 568 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 ART1P52961 327 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 BCAT1P54687 386 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 UCP3P55916 312 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 TIRAPP58753 221 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 ERVFC1-1P60608 527 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 NKX6-1P78426 367 aaPredicted RBP1.07□□□□□ -2.24
COPB1-212ENST00000534771 MTA1Q13330 715 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 KPNB1Q14974 876 aaKnown RBP1.07□□□□□ -2.24
COPB1-212ENST00000534771 PTCHD3Q3KNS1 767 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 KRTAP24-1Q3LI83 254 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 ANO6Q4KMQ2 910 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 PLA1AQ53H76 456 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 CCDC157Q569K6 752 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 WASHC2DQ5SRD0 308 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 PRAMEF19Q5SWL8 479 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 CEP85LQ5SZL2 805 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 EFCAB2Q5VUJ9 269 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 NUGGCQ68CJ6 796 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 PRSS57Q6UWY2 283 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 SRGAP1Q7Z6B7 1085 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 PNMA8AQ86V59 439 aaPredicted RBP1.07□□□□□ -2.24
COPB1-212ENST00000534771 MORC1Q86VD1 984 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 GAS2L3Q86XJ1 694 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 HOMEZQ8IX15 550 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 ADGRF4Q8IZF3 695 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 SLC15A4Q8N697 577 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 DNAJC5GQ8N7S2 189 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 BPIFB1Q8TDL5 484 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 TMEM174Q8WUU8 243 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 LPAR1Q92633 364 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 PIGKQ92643 395 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 MSI2Q96DH6 328 aaKnown RBP1.07□□□□□ -2.24
COPB1-212ENST00000534771 PHF21BQ96EK2 531 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 EDC3Q96F86 508 aaKnown RBP1.07□□□□□ -2.24
COPB1-212ENST00000534771 KAZALD1Q96I82 304 aa1.07□□□□□ -2.24
COPB1-212ENST00000534771 TEKT5Q96M29 485 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms