RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 MKRN2Q9H000 416 aaKnown RBP18.6■□□□□ 0.57
PVT1-220ENST00000524165 AGAP1Q9UPQ3 857 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 DOPEY2Q9Y3R5 2298 aa18.6■□□□□ 0.57
PVT1-220ENST00000524165 CKAP5Q14008 2032 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 WASH3PC4AMC7 463 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 HCRTO43612 131 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 DFNA5O60443 496 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 BRINP1O60477 761 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 ATP2C2O75185 946 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 RFPL3O75679 317 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 ABCD1P33897 745 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 GRIA4P48058 902 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 TRAPPC10P48553 1259 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 SLC12A3P55017 1021 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 UCNP55089 124 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 CLDN6P56747 220 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 TMPRSS3P57727 454 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 TBC1D25Q3MII6 688 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 TDRD10Q5VZ19 366 aaKnown RBP18.59■□□□□ 0.57
PVT1-220ENST00000524165 SLFN12LQ6IEE8 588 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 ERICH1Q86X53 443 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 C8orf48Q96LL4 319 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 DACH1Q9UI36 760 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 AGO2Q9UKV8 859 aaKnown RBP18.59■□□□□ 0.57
PVT1-220ENST00000524165 CDH9Q9ULB4 789 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 ODF2LQ9ULJ1 636 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 STYXL1Q9Y6J8 313 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 NUMA1Q14980 2115 aa18.59■□□□□ 0.57
PVT1-220ENST00000524165 H0Y8X5 98 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 K7ENM7 598 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 ENC1O14682 589 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 ITGB3P05106 788 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 ORC1Q13415 861 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 LY6DQ14210 128 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 HYIQ5T013 277 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 HES3Q5TGS1 186 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 FBXL19Q6PCT2 694 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 C1orf127Q8N9H9 656 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 GTF3C6Q969F1 213 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 SYT15Q9BQS2 421 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 FOXP1Q9H334 677 aaPredicted RBP18.58■□□□□ 0.56
PVT1-220ENST00000524165 CRTAC1Q9NQ79 661 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 SNX9Q9Y5X1 595 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 SLCO1B1Q9Y6L6 691 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 STON1Q9Y6Q2 735 aa18.58■□□□□ 0.56
PVT1-220ENST00000524165 NPHP3-ACAD11A0A0J9YXS1 232 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 ANKRD63C9JTQ0 380 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 NPC1O15118 1278 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 COCHO43405 550 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 SOWAHAQ2M3V2 549 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 BROXQ5VW32 411 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 CRELD2Q6UXH1 353 aaPredicted RBP18.57■□□□□ 0.56
PVT1-220ENST00000524165 USP49Q70CQ1 688 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 DPH6Q7L8W6 267 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 TMPRSS6Q8IU80 811 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 CACTIN-AS1Q8N1I8 211 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 NECAB1Q8N987 351 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 ZNF248Q8NDW4 579 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 PDZD8Q8NEN9 1154 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 OVCA2Q8WZ82 227 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 TTC9Q92623 222 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 PRCCQ92733 491 aaPredicted RBP18.57■□□□□ 0.56
PVT1-220ENST00000524165 SIPA1Q96FS4 1042 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 MED8Q96G25 268 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 LGMNQ99538 433 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 MARK1Q9P0L2 795 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 WDR35Q9P2L0 1181 aa18.57■□□□□ 0.56
PVT1-220ENST00000524165 NEDD8-MDP1E9PL57 170 aa18.56■□□□□ 0.56
PVT1-220ENST00000524165 F8VP50 259 aa18.56■□□□□ 0.56
PVT1-220ENST00000524165 KCNK3O14649 394 aa18.56■□□□□ 0.56
PVT1-220ENST00000524165 TYRP14679 529 aa18.56■□□□□ 0.56
PVT1-220ENST00000524165 PSMC1P62191 440 aaKnown RBP18.56■□□□□ 0.56
PVT1-220ENST00000524165 TFAMQ00059 246 aaKnown RBP18.56■□□□□ 0.56
PVT1-220ENST00000524165 CYP27A1Q02318 531 aa18.56■□□□□ 0.56
PVT1-220ENST00000524165 ENPP2Q13822 863 aa18.56■□□□□ 0.56
PVT1-220ENST00000524165 ANKRD1Q15327 319 aa18.56■□□□□ 0.56
PVT1-220ENST00000524165 ARSHQ5FYA8 562 aa18.56■□□□□ 0.56
PVT1-220ENST00000524165 CXorf38Q8TB03 319 aa18.56■□□□□ 0.56
PVT1-220ENST00000524165 CACTINQ8WUQ7 758 aaKnown RBP18.56■□□□□ 0.56
PVT1-220ENST00000524165 SNX19Q92543 992 aa18.56■□□□□ 0.56
PVT1-220ENST00000524165 BBS2Q9BXC9 721 aa18.56■□□□□ 0.56
PVT1-220ENST00000524165 TM9SF3Q9HD45 589 aa18.56■□□□□ 0.56
PVT1-220ENST00000524165 ITGA11Q9UKX5 1188 aa18.56■□□□□ 0.56
PVT1-220ENST00000524165 JAK2O60674 1132 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 LDOC1O95751 146 aaPredicted RBP18.55■□□□□ 0.56
PVT1-220ENST00000524165 CISD3P0C7P0 127 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 PLA2G4BP0C869 781 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 ACADMP11310 421 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 PLCG1P19174 1290 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 LMO2P25791 158 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 CTSKP43235 329 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 DGKGP49619 791 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 ACADVLP49748 655 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 ZNF131P52739 623 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 GTF2BQ00403 316 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 HECTD3Q5T447 861 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 ARHGAP40Q5TG30 622 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 LIMS2Q7Z4I7 341 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 MYCT1Q8N699 235 aa18.55■□□□□ 0.56
PVT1-220ENST00000524165 KRI1Q8N9T8 703 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms