RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 FCHO1O14526 889 aa4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 TMPRSS11DO60235 418 aa4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 PRAMEF2O60811 474 aa4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 ANXA2P07355 339 aaKnown RBP4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 SLC5A1P13866 664 aa4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 ATP5F1P24539 256 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 RBL1P28749 1068 aa4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 ZNF543Q08ER8 600 aa4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 DAG1Q14118 895 aa4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 RNF44Q7L0R7 432 aa4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 SMCR8Q8TEV9 937 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 EDC3Q96F86 508 aaKnown RBP4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 KAZALD1Q96I82 304 aa4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 ZNF48Q96MX3 618 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 STRBPQ96SI9 672 aaKnown RBP4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 UNKQ9C0B0 810 aaKnown RBP4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 TRIM36Q9NQ86 728 aa4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 CAPN11Q9UMQ6 739 aa4.08□□□□□ -1.76
HMGB1P29-201ENST00000505659 ZNF521Q96K83 1311 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 CYP2D7A0A087X1C5 515 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 POM121BA6NF01 834 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 BTBD19C9JJ37 291 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 E5RJQ4 531 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 INMTO95050 263 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 IL18RAPO95256 599 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 TSHRP16473 764 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 ATICP31939 592 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 EIF4A1P60842 406 aaKnown RBP4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 GPC5P78333 572 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 SLC14A1Q13336 389 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 KCNB1Q14721 858 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 MFSD13AQ14CX5 517 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 RABEP1Q15276 862 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 EPHA10Q5JZY3 1008 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 ZNF813Q6ZN06 617 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 FSTL5Q8N475 847 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 OSR1Q8TAX0 266 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 DENND1AQ8TEH3 1009 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 IPCEF1Q8WWN9 437 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 MAP4K1Q92918 833 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 IQCDQ96DY2 449 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 LRRC46Q96FV0 321 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 ZNF668Q96K58 619 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 HS6ST2Q96MM7 605 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 VPS16Q9H269 839 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 SLC25A32Q9H2D1 315 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 USP29Q9HBJ7 922 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 PNPLA8Q9NP80 782 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 HEYLQ9NQ87 328 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 NKX1-2Q9UD57 310 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 RGS17Q9UGC6 210 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 STEAP1Q9UHE8 339 aa4.07□□□□□ -1.76
HMGB1P29-201ENST00000505659 A8MVJ9 347 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 CLIC1O00299 241 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 APAF1O14727 1248 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 FYB1O15117 783 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 SNX2O60749 519 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 MOSPD3O75425 235 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 ARP10275 920 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 ADRA1DP25100 572 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 HOXD9P28356 352 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 PBX1P40424 430 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 PRIM2P49643 509 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 YPEL5P62699 121 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 MTAPQ13126 283 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 TMTC4Q5T4D3 741 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 MEX3CQ5U5Q3 659 aaKnown RBP4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 CRTC1Q6UUV9 634 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 CCDC33Q8N5R6 958 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 RNF152Q8N8N0 203 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 ZNF398Q8TD17 642 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 TTC17Q96AE7 1141 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 FAM118BQ9BPY3 351 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 SAP30LQ9HAJ7 183 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 METTL14Q9HCE5 456 aaKnown RBP4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 VPS45Q9NRW7 570 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 TRNAU1APQ9NX07 287 aaKnown RBP4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 ELOVL5Q9NYP7 299 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 CHPF2Q9P2E5 772 aa4.06□□□□□ -1.76
HMGB1P29-201ENST00000505659 COL15A1P39059 1388 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 H3BNC9 293 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 PPEF2O14830 753 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 DSCR3O14972 297 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 WDR47O94967 919 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 MBPP02686 304 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 MYL3P08590 195 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 TMEM225BP0DP42 221 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 CYP19A1P11511 503 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 CD19P15391 556 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 PHKG2P15735 406 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 RPL17P18621 184 aaKnown RBP4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 FGFR2P21802 821 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 GALNSP34059 522 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 MMP13P45452 471 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 CASP5P51878 434 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 RAE1P78406 368 aaKnown RBP4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 CFHR3Q02985 330 aa4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 KPNB1Q14974 876 aaKnown RBP4.05□□□□□ -1.76
HMGB1P29-201ENST00000505659 ST3GAL2Q16842 350 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms