RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 C10orf120Q5SQS8 335 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 BSPRYQ5W0U4 402 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 CC2D1AQ6P1N0 951 aaPredicted RBP16.76■□□□□ 0.27
SSBP1-214ENST00000498107 BPIFB1Q8TDL5 484 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 RSAD2Q8WXG1 361 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 C18orf8Q96DM3 657 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 SLC22A12Q96S37 553 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 CPXM1Q96SM3 734 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 RNF38Q9H0F5 515 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 ZNHIT6Q9NWK9 470 aaKnown RBP16.76■□□□□ 0.27
SSBP1-214ENST00000498107 ASNSD1Q9NWL6 643 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 STRIP2Q9ULQ0 834 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 YJEFN3A6XGL0 299 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 E7ENQ6 273 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 TNFRSF10AO00220 468 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 PAPSS1O43252 624 aaPredicted RBP16.75■□□□□ 0.27
SSBP1-214ENST00000498107 DCXO43602 365 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 GABBR2O75899 941 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 SRFP11831 508 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 GABRB2P47870 512 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 FCHO2Q0JRZ9 810 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 PTPN20Q4JDL3 420 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 ARHGAP29Q52LW3 1261 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 TDRD12Q587J7 1177 aaKnown RBP16.75■□□□□ 0.27
SSBP1-214ENST00000498107 NAA35Q5VZE5 725 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 OR6B2Q6IFH4 312 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 VITQ6UXI7 678 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 BEND5Q7L4P6 421 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 TMC6Q7Z403 805 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 GPIHBP1Q8IV16 184 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 CNGA4Q8IV77 575 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 DRC7Q8IY82 874 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 IRF7Q92985 503 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 FAM149B1Q96BN6 582 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 SMG9Q9H0W8 520 aaKnown RBP16.75■□□□□ 0.27
SSBP1-214ENST00000498107 HAUS4Q9H6D7 363 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 OSER1Q9NX31 292 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 MUTYHQ9UIF7 546 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 DUSP12Q9UNI6 340 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 CPQQ9Y646 472 aa16.75■□□□□ 0.27
SSBP1-214ENST00000498107 HELZP42694 1942 aaKnown RBP16.74■□□□□ 0.27
SSBP1-214ENST00000498107 CAPN9O14815 690 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 ZNF263O14978 683 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 CHADO15335 359 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 AP5Z1O43299 807 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 SERPING1P05155 500 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 UNGP13051 313 aaPredicted RBP16.74■□□□□ 0.27
SSBP1-214ENST00000498107 SCNN1AP37088 669 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 PGFP49763 221 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 YWHAZP63104 245 aaKnown RBP16.74■□□□□ 0.27
SSBP1-214ENST00000498107 COG7P83436 770 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 CENPCQ03188 943 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 USP4Q13107 963 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 CLEC16AQ2KHT3 1053 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 BHLHA9Q7RTU4 235 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 OR8K1Q8NGG5 319 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 SH3RF2Q8TEC5 729 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 CPA5Q8WXQ8 436 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 NDRG1Q92597 394 aaKnown RBP16.74■□□□□ 0.27
SSBP1-214ENST00000498107 RPP25Q9BUL9 199 aaKnown RBP16.74■□□□□ 0.27
SSBP1-214ENST00000498107 BRD9Q9H8M2 597 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 POPDC2Q9HBU9 364 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 SLC2A4RGQ9NR83 387 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 WDR35Q9P2L0 1181 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 CCL26Q9Y258 94 aa16.74■□□□□ 0.27
SSBP1-214ENST00000498107 LEFTY2O00292 366 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 SLC9A3R1O14745 358 aaPredicted RBP16.73■□□□□ 0.27
SSBP1-214ENST00000498107 HSF2BPO75031 334 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 ERBB2P04626 1255 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 CALB1P05937 261 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 MMP8P22894 467 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 GDI1P31150 447 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 HNRNPH3P31942 346 aaKnown RBP16.73■□□□□ 0.27
SSBP1-214ENST00000498107 KPNA1P52294 538 aaPredicted RBP16.73■□□□□ 0.27
SSBP1-214ENST00000498107 SLC6A3Q01959 620 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 EFEMP1Q12805 493 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 MTF1Q14872 753 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 ZNF77Q15935 545 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 ST13P5Q8NFI4 369 aaPredicted RBP16.73■□□□□ 0.27
SSBP1-214ENST00000498107 CLEC4CQ8WTT0 213 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 DNASE1L2Q92874 299 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 PCDHB18PQ96TA0 734 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 DNAJC7Q99615 494 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 PLA2G2FQ9BZM2 168 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 SMPD4Q9NXE4 827 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 MARCH2Q9P0N8 246 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 RASAL2Q9UJF2 1139 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 LSM7Q9UK45 103 aaKnown RBP16.73■□□□□ 0.27
SSBP1-214ENST00000498107 SH3BP1Q9Y3L3 701 aa16.73■□□□□ 0.27
SSBP1-214ENST00000498107 E2F8A0AVK6 867 aa16.72■□□□□ 0.27
SSBP1-214ENST00000498107 AKR1B15C9JRZ8 316 aaPredicted RBP16.72■□□□□ 0.27
SSBP1-214ENST00000498107 TBX18O95935 607 aa16.72■□□□□ 0.27
SSBP1-214ENST00000498107 GZMAP12544 262 aa16.72■□□□□ 0.27
SSBP1-214ENST00000498107 NCAM1P13591 858 aa16.72■□□□□ 0.27
SSBP1-214ENST00000498107 ZXDAP98168 799 aa16.72■□□□□ 0.27
SSBP1-214ENST00000498107 GRM2Q14416 872 aa16.72■□□□□ 0.27
SSBP1-214ENST00000498107 ARID5BQ14865 1188 aa16.72■□□□□ 0.27
SSBP1-214ENST00000498107 PDGFRLQ15198 375 aa16.72■□□□□ 0.27
SSBP1-214ENST00000498107 E4F1Q66K89 784 aaPredicted RBP16.72■□□□□ 0.27
SSBP1-214ENST00000498107 MSANTD2Q6P1R3 559 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms