RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 TYROBPO43914 113 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 TGM2P21980 687 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 IL4RP24394 825 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 AKAP5P24588 427 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 ATP5OP48047 213 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 SARNPP82979 210 aaKnown RBP15.39■□□□□ 0.05
CHTOP-206ENST00000495554 SNX17Q15036 470 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 FAM133BQ5BKY9 247 aaKnown RBP15.39■□□□□ 0.05
CHTOP-206ENST00000495554 GLRA4Q5JXX5 417 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 CYB5D1Q6P9G0 228 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 RPAINQ86UA6 219 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 C4orf33Q8N1A6 199 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 FBF1Q8TES7 1133 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 PAFAH2Q99487 392 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 KLHL14Q9P2G3 628 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 CFAP69A5D8W1 941 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 MANSC4A6NHS7 340 aaPredicted RBP15.39■□□□□ 0.05
CHTOP-206ENST00000495554 KRT4P19013 534 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 RPA3P35244 121 aaPredicted RBP15.39■□□□□ 0.05
CHTOP-206ENST00000495554 ARHGAP17Q68EM7 881 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 C1orf228Q6PIY5 440 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 OR6B3Q8NGW1 331 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 KHSRPQ92945 711 aaKnown RBP eCLIP15.39■□□□□ 0.051e-9■□□□□ 11.3
CHTOP-206ENST00000495554 RNF39Q9H2S5 420 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 CNTN3Q9P232 1028 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 PAK5Q9P286 719 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 A0A1W2PPM1 405 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 APOL1O14791 398 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 MDM4O15151 490 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 CHADO15335 359 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 PAPSS1O43252 624 aaPredicted RBP15.38■□□□□ 0.05
CHTOP-206ENST00000495554 RECQL4O94761 1208 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 MYL3P08590 195 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 GBP2P32456 591 aaPredicted RBP15.38■□□□□ 0.05
CHTOP-206ENST00000495554 MSH2P43246 934 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 BCAR1P56945 870 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 KCNJ11Q14654 390 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 ZRSR2Q15696 482 aaKnown RBP15.38■□□□□ 0.05
CHTOP-206ENST00000495554 GALNTL6Q49A17 601 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 UBXN11Q5T124 520 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 CGB2Q6NT52 195 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 NME8Q8N427 588 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 RTP4Q96DX8 246 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 TRIM6Q9C030 488 aaPredicted RBP15.38■□□□□ 0.05
CHTOP-206ENST00000495554 USP29Q9HBJ7 922 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 PCDH18Q9HCL0 1135 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 ZNF487B1APH4 448 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 UBOX5O94941 541 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 ZWINTO95229 277 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 CTGFP29279 349 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 NRLP54845 237 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 PDK4Q16654 411 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 SOWAHAQ2M3V2 549 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 C9orf57Q5W0N0 161 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 RNF43Q68DV7 783 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 SLC9A4Q6AI14 798 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 IFNL1Q8IU54 200 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 CYTH2Q99418 400 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 ZNF670Q9BS34 389 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 FRMD8Q9BZ67 464 aaPredicted RBP15.38■□□□□ 0.05
CHTOP-206ENST00000495554 RXFP1Q9HBX9 757 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 UBQLN1Q9UMX0 589 aaKnown RBP15.38■□□□□ 0.05
CHTOP-206ENST00000495554 STARD13Q9Y3M8 1113 aa15.38■□□□□ 0.05
CHTOP-206ENST00000495554 A8MXQ7 604 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 GABBR2O75899 941 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 HOXC8P31273 242 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 CPT1AP50416 773 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 CBLBQ13191 982 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 EFTUD2Q15029 972 aaKnown RBP eCLIP15.37■□□□□ 0.051e-8■■■■□ 26.2
CHTOP-206ENST00000495554 PQLC3Q8N755 202 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 FAF2Q96CS3 445 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 LPIN3Q9BQK8 851 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 SNRNP25Q9BV90 132 aaKnown RBP15.37■□□□□ 0.05
CHTOP-206ENST00000495554 Q9Y3F1 56 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 RALGAPA2Q2PPJ7 1873 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 SMIM28A0A1B0GU29 152 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 CFAP73A6NFT4 308 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 KCNN4O15554 427 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 SPAG6O75602 509 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 AXLP30530 894 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 ELK3P41970 407 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 MTM1Q13496 603 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 XKR4Q5GH76 650 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 HHATQ5VTY9 493 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 FAM47EQ6ZV65 393 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 SAPCD2Q86UD0 394 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 PARP9Q8IXQ6 854 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 CCDC63Q8NA47 563 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 PCDH19Q8TAB3 1148 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 ALKBH8Q96BT7 664 aaKnown RBP15.37■□□□□ 0.05
CHTOP-206ENST00000495554 APOL6Q9BWW8 343 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 RAB6BQ9NRW1 208 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 GPATCH2LQ9NWQ4 482 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 KLK14Q9P0G3 267 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 GGT7Q9UJ14 662 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 CHMP2BQ9UQN3 213 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 HEY1Q9Y5J3 304 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 TEX264Q9Y6I9 313 aa15.37■□□□□ 0.05
CHTOP-206ENST00000495554 BCLAF3A2AJT9 711 aaKnown RBP15.36■□□□□ 0.05
CHTOP-206ENST00000495554 PIRO00625 290 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms