RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.09■□□□□ 0.015e-7■■■■■ 67.7
VARS-228ENST00000495010 AGPAT3Q9NRZ7 376 aa15.09■□□□□ 0.01
VARS-228ENST00000495010 WDR35Q9P2L0 1181 aa15.09■□□□□ 0.01
VARS-228ENST00000495010 GON4LQ3T8J9 2241 aa15.08■□□□□ 0
VARS-228ENST00000495010 A0A087X0B3 334 aa15.08■□□□□ 0
VARS-228ENST00000495010 TRIM24O15164 1050 aa15.08■□□□□ 0
VARS-228ENST00000495010 TLR5O60602 858 aa15.08■□□□□ 0
VARS-228ENST00000495010 AP1G2O75843 785 aa15.08■□□□□ 0
VARS-228ENST00000495010 STAU1O95793 577 aaKnown RBP15.08■□□□□ 0
VARS-228ENST00000495010 TYRP14679 529 aa15.08■□□□□ 0
VARS-228ENST00000495010 BIRC3Q13489 604 aa15.08■□□□□ 0
VARS-228ENST00000495010 FAM173BQ6P4H8 233 aa15.08■□□□□ 0
VARS-228ENST00000495010 KIAA1324Q6UXG2 1013 aaKnown RBP15.08■□□□□ 0
VARS-228ENST00000495010 TPGS1Q6ZTW0 290 aa15.08■□□□□ 0
VARS-228ENST00000495010 HTR3DQ70Z44 454 aa15.08■□□□□ 0
VARS-228ENST00000495010 MIB1Q86YT6 1006 aa15.08■□□□□ 0
VARS-228ENST00000495010 ZNF507Q8TCN5 953 aa15.08■□□□□ 0
VARS-228ENST00000495010 CAMK1GQ96NX5 476 aa15.08■□□□□ 0
VARS-228ENST00000495010 ACOX2Q99424 681 aa15.08■□□□□ 0
VARS-228ENST00000495010 FBXO44Q9H4M3 255 aa15.08■□□□□ 0
VARS-228ENST00000495010 TLR8Q9NR97 1041 aaKnown RBP15.08■□□□□ 0
VARS-228ENST00000495010 APOBEC2Q9Y235 224 aaKnown RBP15.08■□□□□ 0
VARS-228ENST00000495010 MEI4A8MW99 385 aa15.07■□□□□ 0
VARS-228ENST00000495010 CACNG3O60359 315 aa15.07■□□□□ 0
VARS-228ENST00000495010 FTH1P19P0C7X4 201 aa15.07■□□□□ 0
VARS-228ENST00000495010 TRIM21P19474 475 aaKnown RBP15.07■□□□□ 0
VARS-228ENST00000495010 ATP5C1P36542 298 aaKnown RBP15.07■□□□□ 0
VARS-228ENST00000495010 DGKGP49619 791 aa15.07■□□□□ 0
VARS-228ENST00000495010 CDH8P55286 799 aa15.07■□□□□ 0
VARS-228ENST00000495010 SNRPFP62306 86 aaKnown RBP15.07■□□□□ 0
VARS-228ENST00000495010 SCAPQ12770 1279 aa15.07■□□□□ 0
VARS-228ENST00000495010 SLC39A14Q15043 492 aa15.07■□□□□ 0
VARS-228ENST00000495010 ZNF699Q32M78 642 aa15.07■□□□□ 0
VARS-228ENST00000495010 ZNF667Q5HYK9 610 aa15.07■□□□□ 0
VARS-228ENST00000495010 FAM26FQ5R3K3 315 aa15.07■□□□□ 0
VARS-228ENST00000495010 NAXDQ8IW45 347 aa15.07■□□□□ 0
VARS-228ENST00000495010 NELFCDQ8IXH7 590 aa15.07■□□□□ 0
VARS-228ENST00000495010 WBP2Q969T9 261 aa15.07■□□□□ 0
VARS-228ENST00000495010 ZNF419Q96HQ0 510 aaPredicted RBP15.07■□□□□ 0
VARS-228ENST00000495010 GABRG3Q99928 467 aa15.07■□□□□ 0
VARS-228ENST00000495010 ZDHHC5Q9C0B5 715 aa15.07■□□□□ 0
VARS-228ENST00000495010 SMYD3Q9H7B4 428 aa15.07■□□□□ 0
VARS-228ENST00000495010 KRT82Q9NSB4 513 aa15.07■□□□□ 0
VARS-228ENST00000495010 IL37Q9NZH6 218 aa15.07■□□□□ 0
VARS-228ENST00000495010 HCN2Q9UL51 889 aa15.07■□□□□ 0
VARS-228ENST00000495010 RAD54BQ9Y620 910 aa15.07■□□□□ 0
VARS-228ENST00000495010 MYO18AQ92614 2054 aaKnown RBP15.07■□□□□ 0
VARS-228ENST00000495010 TAF4O00268 1085 aa15.06■□□□□ 0
VARS-228ENST00000495010 GFRA2O00451 464 aa15.06■□□□□ 0
VARS-228ENST00000495010 TGFB1I1O43294 461 aa15.06■□□□□ 0
VARS-228ENST00000495010 ZDHHC11BP0C7U3 371 aa15.06■□□□□ 0
VARS-228ENST00000495010 P4HA1P13674 534 aa15.06■□□□□ 0
VARS-228ENST00000495010 MAOBP27338 520 aa15.06■□□□□ 0
VARS-228ENST00000495010 HOXD13P35453 343 aa15.06■□□□□ 0
VARS-228ENST00000495010 STARD3Q14849 445 aa15.06■□□□□ 0
VARS-228ENST00000495010 C19orf48Q6RUI8 117 aa15.06■□□□□ 0
VARS-228ENST00000495010 SCARA5Q6ZMJ2 495 aa15.06■□□□□ 0
VARS-228ENST00000495010 ACOT1Q86TX2 421 aa15.06■□□□□ 0
VARS-228ENST00000495010 PNPLA1Q8N8W4 532 aa15.06■□□□□ 0
VARS-228ENST00000495010 ADAMTS14Q8WXS8 1223 aa15.06■□□□□ 0
VARS-228ENST00000495010 ZNF516Q92618 1163 aa15.06■□□□□ 0
VARS-228ENST00000495010 MRGPRX1Q96LB2 322 aa15.06■□□□□ 0
VARS-228ENST00000495010 TRIM9Q9C026 710 aa15.06■□□□□ 0
VARS-228ENST00000495010 SLC6A17Q9H1V8 727 aa15.06■□□□□ 0
VARS-228ENST00000495010 CUEDC2Q9H467 287 aa15.06■□□□□ 0
VARS-228ENST00000495010 CCDC86Q9H6F5 360 aaKnown RBP15.06■□□□□ 0
VARS-228ENST00000495010 CACNA2D2Q9NY47 1150 aa15.06■□□□□ 0
VARS-228ENST00000495010 UBE4BO95155 1302 aa15.06■□□□□ 0
VARS-228ENST00000495010 PCDH15Q96QU1 1955 aa15.05■□□□□ 0
VARS-228ENST00000495010 A0A1B0GTW7 788 aa15.05■□□□□ -0
VARS-228ENST00000495010 FAM92AA1XBS5 289 aa15.05■□□□□ -0
VARS-228ENST00000495010 PRRT4C9JH25 899 aa15.05■□□□□ -0
VARS-228ENST00000495010 EXOC3O60645 756 aa15.05■□□□□ -0
VARS-228ENST00000495010 CD6P30203 668 aa15.05■□□□□ -0
VARS-228ENST00000495010 AP3M2P53677 418 aa15.05■□□□□ -0
VARS-228ENST00000495010 MAP3K7CLP57077 242 aa15.05■□□□□ -0
VARS-228ENST00000495010 GRIK2Q13002 908 aa15.05■□□□□ -0
VARS-228ENST00000495010 STK38Q15208 465 aa15.05■□□□□ -0
VARS-228ENST00000495010 TOGARAM2Q6ZUX3 1019 aa15.05■□□□□ -0
VARS-228ENST00000495010 PAQR9Q6ZVX9 377 aa15.05■□□□□ -0
VARS-228ENST00000495010 EPM2AIP1Q7L775 607 aaPredicted RBP15.05■□□□□ -0
VARS-228ENST00000495010 SETD7Q8WTS6 366 aaKnown RBP15.05■□□□□ -0
VARS-228ENST00000495010 DHX58Q96C10 678 aa15.05■□□□□ -0
VARS-228ENST00000495010 USP28Q96RU2 1077 aa15.05■□□□□ -0
VARS-228ENST00000495010 KLF16Q9BXK1 252 aaPredicted RBP15.05■□□□□ -0
VARS-228ENST00000495010 XYLT2Q9H1B5 865 aa15.05■□□□□ -0
VARS-228ENST00000495010 MIR1-1HGQ9H1L0 117 aa15.05■□□□□ -0
VARS-228ENST00000495010 KBTBD4Q9NVX7 518 aa15.05■□□□□ -0
VARS-228ENST00000495010 MARK1Q9P0L2 795 aa15.05■□□□□ -0
VARS-228ENST00000495010 CGNQ9P2M7 1197 aaKnown RBP15.05■□□□□ -0
VARS-228ENST00000495010 MORC2Q9Y6X9 1032 aaPredicted RBP15.05■□□□□ -0
VARS-228ENST00000495010 CACNA1EQ15878 2313 aa15.05■□□□□ -0
VARS-228ENST00000495010 GJB3O75712 270 aa15.04■□□□□ -0
VARS-228ENST00000495010 TBX18O95935 607 aa15.04■□□□□ -0
VARS-228ENST00000495010 CCDC130P13994 396 aa15.04■□□□□ -0
VARS-228ENST00000495010 NCOA4Q13772 614 aa15.04■□□□□ -0
VARS-228ENST00000495010 FUKQ8N0W3 1084 aa15.04■□□□□ -0
VARS-228ENST00000495010 IQUBQ8NA54 791 aa15.04■□□□□ -0
VARS-228ENST00000495010 SLC2A14Q8TDB8 520 aa15.04■□□□□ -0
VARS-228ENST00000495010 BHMTQ93088 406 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms