RNA–Protein interactions for RNA: ENST00000491086.5

RNF13-215, Transcript of ring finger protein 13, human

TSL 2

Gene RNF13, Length 1,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF13-215	ENST00000491086	TFE3	P19532	575 aa	Predicted RBP	13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	MARCKSL1	P49006	195 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	ZNF143	P52747	638 aa	Predicted RBP	13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	TAS2R40	P59535	323 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	CREM	Q03060	361 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	SMC1A	Q14683	1233 aa	Known RBP	13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	DUSP6	Q16828	381 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	EFHC1	Q5JVL4	640 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	SH3PXD2A	Q5TCZ1	1133 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	DAB2IP	Q5VWQ8	1189 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	DCUN1D2	Q6PH85	259 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	BEND5	Q7L4P6	421 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	SCN4B	Q8IWT1	228 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	TCEAL8	Q8IYN2	117 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	SYCE1	Q8N0S2	351 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	NUP93	Q8N1F7	819 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	KIF18A	Q8NI77	898 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	ALG3	Q92685	438 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	CEP295NL	Q96MC4	621 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	TTLL2	Q9BWV7	592 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	CALCOCO1	Q9P1Z2	691 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	MAFF	Q9ULX9	164 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	SCML2	Q9UQR0	700 aa		13.57	□□□□□ -0.24
RNF13-215	ENST00000491086	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	CTAGE9	A4FU28	777 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	TMEM110-MUSTN1	A8MSY1	372 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	TGM5	O43548	720 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	HSF2BP	O75031	334 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	CLASP2	O75122	1294 aa	Known RBP	13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	DAB1	O75553	588 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	ENDOD1	O94919	500 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	HMGA1	P17096	107 aa	Known RBP	13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	GPD1	P21695	349 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	CTNNA2	P26232	953 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	SLC1A1	P43005	524 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	PTPN9	P43378	593 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	PITX1	P78337	314 aa	Predicted RBP	13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	MTMR3	Q13615	1198 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	PIGH	Q14442	188 aa	Predicted RBP	13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	TJAP1	Q5JTD0	557 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	DCAF12L1	Q5VU92	463 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	SYPL2	Q5VXT5	272 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	PEX26	Q7Z412	305 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	SIX6OS1	Q8N1H7	587 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	GPR152	Q8TDT2	470 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	ADAMTS19	Q8TE59	1207 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	UBE2Q2	Q8WVN8	375 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	KRT35	Q92764	455 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	NPY6R	Q99463	290 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	CNPY3	Q9BT09	278 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	L2HGDH	Q9H9P8	463 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	NMUR1	Q9HB89	426 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	COMMD8	Q9NX08	183 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	OSER1	Q9NX31	292 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	CLEC1B	Q9P126	229 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	LCMT1	Q9UIC8	334 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	AMFR	Q9UKV5	643 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	SNX12	Q9UMY4	172 aa		13.56	□□□□□ -0.24
RNF13-215	ENST00000491086	SLC38A8	A6NNN8	435 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	LRCH4	O75427	683 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	C1R	P00736	705 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	ZDHHC11B	P0C7U3	371 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	PDGFRA	P16234	1089 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	EPCAM	P16422	314 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	CTNNA1	P35221	906 aa	Known RBP	13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	MATK	P42679	507 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	TUFM	P49411	452 aa	Known RBP	13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	RNASE9	P60153	205 aa	Known RBP	13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	RPL10A	P62906	217 aa	Known RBP	13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	YWHAZ	P63104	245 aa	Known RBP	13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	SLC25A11	Q02978	314 aa	Known RBP	13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	ADAM15	Q13444	863 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	COL19A1	Q14993	1142 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	ACAP1	Q15027	740 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	CTC1	Q2NKJ3	1217 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	MGAT5B	Q3V5L5	792 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	TXNRD3NB	Q6F5E7	133 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	DEFB106A	Q8N104	65 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	EFHB	Q8N7U6	833 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	ZNF592	Q92610	1267 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	CFAP57	Q96MR6	1250 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	SEPT5	Q99719	369 aa	Predicted RBP	13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	NGRN	Q9NPE2	291 aa	Known RBP	13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	FBXW11	Q9UKB1	542 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	YIPF1	Q9Y548	306 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	PCDHA3	Q9Y5H8	950 aa		13.55	□□□□□ -0.24
RNF13-215	ENST00000491086	GRXCR2	A6NFK2	248 aa		13.54	□□□□□ -0.24
RNF13-215	ENST00000491086	SART1	O43290	800 aa	Known RBP	13.54	□□□□□ -0.24
RNF13-215	ENST00000491086	SRGAP2	O75044	1071 aa		13.54	□□□□□ -0.24
RNF13-215	ENST00000491086	IGLV3-25	P01717	112 aa		13.54	□□□□□ -0.24
RNF13-215	ENST00000491086	LTF	P02788	710 aa		13.54	□□□□□ -0.24
RNF13-215	ENST00000491086	BMP1	P13497	986 aa		13.54	□□□□□ -0.24
RNF13-215	ENST00000491086	PSMA2	P25787	234 aa		13.54	□□□□□ -0.24
RNF13-215	ENST00000491086	IL1R2	P27930	398 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms