RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 TMEM92Q6UXU6 159 aa20.57■□□□□ 0.88
R3HDM1-215ENST00000483021 TTC30AQ86WT1 665 aa20.57■□□□□ 0.88
R3HDM1-215ENST00000483021 SFTPA1Q8IWL2 248 aa20.57■□□□□ 0.88
R3HDM1-215ENST00000483021 PHTF2Q8N3S3 785 aa20.57■□□□□ 0.88
R3HDM1-215ENST00000483021 OLIG1Q8TAK6 271 aa20.57■□□□□ 0.88
R3HDM1-215ENST00000483021 TAS1R2Q8TE23 839 aa20.57■□□□□ 0.88
R3HDM1-215ENST00000483021 CYFIP2Q96F07 1278 aa20.57■□□□□ 0.88
R3HDM1-215ENST00000483021 CNTNAP3BQ96NU0 1288 aa20.57■□□□□ 0.88
R3HDM1-215ENST00000483021 CNTNAP3Q9BZ76 1288 aa20.57■□□□□ 0.88
R3HDM1-215ENST00000483021 SMOC1Q9H4F8 434 aa20.57■□□□□ 0.88
R3HDM1-215ENST00000483021 TMEM8AQ9HCN3 771 aa20.57■□□□□ 0.88
R3HDM1-215ENST00000483021 LSM7Q9UK45 103 aaKnown RBP20.57■□□□□ 0.88
R3HDM1-215ENST00000483021 MAPK8IP1Q9UQF2 711 aa20.57■□□□□ 0.88
R3HDM1-215ENST00000483021 TNRC6BQ9UPQ9 1833 aaKnown RBP20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 TBC1D3BA6NDS4 549 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 ANTXRLA6NF34 631 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 CILPO75339 1184 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 TULP3O75386 442 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 KCNA4P22459 653 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 GTF2H1P32780 548 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 PPP3CAQ08209 521 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 ADAM9Q13443 819 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 HTR3DQ70Z44 454 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 TTC39CQ8N584 583 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 TERB1Q8NA31 727 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 FAXDC2Q96IV6 333 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 CHAMP1Q96JM3 812 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 TWNKQ96RR1 684 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 EDEM2Q9BV94 578 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 APOBEC3GQ9HC16 384 aaKnown RBP20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 BCCIPQ9P287 314 aaKnown RBP eCLIP20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 INVSQ9Y283 1065 aa20.56■□□□□ 0.88
R3HDM1-215ENST00000483021 HHLA1C9JL84 531 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 TM4SF5O14894 197 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 CYP26A1O43174 497 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 HNRNPLP14866 589 aaKnown RBP eCLIP20.55■□□□□ 0.889e-14■■□□□ 13.7
R3HDM1-215ENST00000483021 ACO1P21399 889 aaKnown RBP20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 PSEN1P49768 467 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 BYSLQ13895 437 aaKnown RBP20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 EDRF1Q3B7T1 1238 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 ZCWPW2Q504Y3 356 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 KRT39Q6A163 491 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 TCEAL6Q6IPX3 200 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 KLHDC10Q6PID8 442 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 GPRIN1Q7Z2K8 1008 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 CYP2U1Q7Z449 544 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 TADA2BQ86TJ2 420 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 ZNF513Q8N8E2 541 aaPredicted RBP20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 NAT16Q8N8M0 369 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 TCEAL3Q969E4 200 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 JAKMIP2Q96AA8 810 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 KLF16Q9BXK1 252 aaPredicted RBP20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 MMRN2Q9H8L6 949 aa20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.55■□□□□ 0.886e-11■■■■■ 47.9
R3HDM1-215ENST00000483021 KMT2BQ9UMN6 2715 aaPredicted RBP20.55■□□□□ 0.88
R3HDM1-215ENST00000483021 ADAM23O75077 832 aa20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 ZNF202O95125 648 aa20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 CD58P19256 250 aa20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 BCKDHBP21953 392 aa20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 P2RY2P41231 377 aa20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 PGFP49763 221 aa20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 C10orf76Q5T2E6 689 aa20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 EMC10Q5UCC4 262 aa20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 TMEM25Q86YD3 366 aa20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 WBP2Q969T9 261 aa20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 XPO6Q96QU8 1125 aaKnown RBP20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 GOLPH3LQ9H4A5 285 aa20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 WDR35Q9P2L0 1181 aa20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 DNMT3LQ9UJW3 386 aa20.54■□□□□ 0.88
R3HDM1-215ENST00000483021 MAP1BP46821 2468 aaKnown RBP20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 CEP192Q8TEP8 1941 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 CEP295Q9C0D2 2601 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 TCRBV21S2A2A0A5A6 115 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 CACNG3O60359 315 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 STX10O60499 249 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 GREM1O60565 184 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 TBX18O95935 607 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 DHPSP49366 369 aaPredicted RBP20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 MXI1P50539 228 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 MCCD1P59942 119 aaPredicted RBP20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 GRAMD4Q6IC98 578 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 LPCAT2Q7L5N7 544 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 CCDC186Q7Z3E2 898 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 HMGB4Q8WW32 186 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 CDK5RAP1Q96SZ6 601 aaKnown RBP20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 LSM14BQ9BX40 385 aaKnown RBP20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 DUSP16Q9BY84 665 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 FAM124BQ9H5Z6 455 aaPredicted RBP20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 DNAJC17Q9NVM6 304 aaKnown RBP20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 OSER1Q9NX31 292 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 MARK1Q9P0L2 795 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 STARD13Q9Y3M8 1113 aa20.53■□□□□ 0.88
R3HDM1-215ENST00000483021 A0A1W2PQH9 124 aa20.52■□□□□ 0.88
R3HDM1-215ENST00000483021 LNP1A1A4G5 178 aa20.52■□□□□ 0.88
R3HDM1-215ENST00000483021 NEDD8-MDP1E9PL57 170 aa20.52■□□□□ 0.88
R3HDM1-215ENST00000483021 KHNYNO15037 678 aaKnown RBP20.52■□□□□ 0.88
R3HDM1-215ENST00000483021 EPB41P11171 864 aaKnown RBP20.52■□□□□ 0.88
R3HDM1-215ENST00000483021 RARGP13631 454 aa20.52■□□□□ 0.88
R3HDM1-215ENST00000483021 DPP6P42658 865 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms