RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 PSD4Q8NDX1 1056 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 KLHDC4Q8TBB5 520 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 MIPOL1Q8TD10 442 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 DENND1AQ8TEH3 1009 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 ACO2Q99798 780 aaKnown RBP4.49□□□□□ -1.69
CMSS1-204ENST00000479555 WACQ9BTA9 647 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 VEZTQ9HBM0 779 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 SLAMF7Q9NQ25 335 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 HOMER3Q9NSC5 361 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 GNL3LQ9NVN8 582 aaKnown RBP4.49□□□□□ -1.69
CMSS1-204ENST00000479555 ELOVL5Q9NYP7 299 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 EHD3Q9NZN3 535 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 POLKQ9UBT6 870 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 TBC1D30Q9Y2I9 924 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 STXBP5LQ9Y2K9 1186 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 PCDHB1Q9Y5F3 818 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 EIF2AK4Q9P2K8 1649 aaKnown RBP4.49□□□□□ -1.69
CMSS1-204ENST00000479555 GRIN2AQ12879 1464 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 GRIN2BQ13224 1484 aa4.49□□□□□ -1.69
CMSS1-204ENST00000479555 FRMPD2Q68DX3 1309 aaPredicted RBP4.48□□□□□ -1.69
CMSS1-204ENST00000479555 PTPRGP23470 1445 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 GOLGA6L10A6NI86 522 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 EFCAB8A8MWE9 144 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 KCNU1A8MYU2 1149 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 PPP6CO00743 305 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 FTH1P19P0C7X4 201 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 H2AFXP16104 143 aaPredicted RBP4.48□□□□□ -1.69
CMSS1-204ENST00000479555 GCFC2P16383 781 aaKnown RBP4.48□□□□□ -1.69
CMSS1-204ENST00000479555 PHKA1P46020 1223 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 TMF1P82094 1093 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 DSC2Q02487 901 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 NOGQ13253 232 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 MVPQ14764 893 aaKnown RBP4.48□□□□□ -1.69
CMSS1-204ENST00000479555 FILIP1LQ4L180 1135 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 AWAT2Q6E213 333 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 CCDC186Q7Z3E2 898 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 SDCCAG8Q86SQ7 713 aaPredicted RBP4.48□□□□□ -1.69
CMSS1-204ENST00000479555 TADA2BQ86TJ2 420 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 CEP112Q8N8E3 955 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 ZBTB34Q8NCN2 500 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 BICD2Q8TD16 824 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 CGRRF1Q99675 332 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 VRK1Q99986 396 aaPredicted RBP4.48□□□□□ -1.69
CMSS1-204ENST00000479555 MACROD1Q9BQ69 325 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 TRIM6Q9C030 488 aaPredicted RBP4.48□□□□□ -1.69
CMSS1-204ENST00000479555 ARFGAP3Q9NP61 516 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 ARHGEF3Q9NR81 526 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 SERTAD4Q9NUC0 356 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 AGAP1Q9UPQ3 857 aa4.48□□□□□ -1.69
CMSS1-204ENST00000479555 LRRC14BA6NHZ5 514 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 E7ENX8 843 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 F2RL2O00254 374 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 CHUKO15111 745 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 PPM1DO15297 605 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 TUSC2O75896 110 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 UBXN7O94888 489 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 ERLIN2O94905 339 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 PNMA6AP0CW24 399 aaPredicted RBP4.47□□□□□ -1.69
CMSS1-204ENST00000479555 NDUFB7P17568 137 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 HTR1BP28222 390 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 SLC8A1P32418 973 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 CCT4P50991 539 aaKnown RBP4.47□□□□□ -1.69
CMSS1-204ENST00000479555 CLCN2P51788 898 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 MAP2K6P52564 334 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 ZNF135P52742 658 aaPredicted RBP4.47□□□□□ -1.69
CMSS1-204ENST00000479555 HK3P52790 923 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 CACNB3P54284 484 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 SLC8A3P57103 927 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 RBM6P78332 1123 aaKnown RBP4.47□□□□□ -1.69
CMSS1-204ENST00000479555 GPSM2P81274 684 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 SP2Q02086 613 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 TAP2Q03519 686 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 IFFO1Q0D2I5 559 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 BRD3Q15059 726 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 PLCB4Q15147 1175 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 ZRSR2Q15696 482 aaKnown RBP4.47□□□□□ -1.69
CMSS1-204ENST00000479555 ZNF260Q3ZCT1 412 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 ANO6Q4KMQ2 910 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 KHDC1Q4VXA5 237 aaKnown RBP4.47□□□□□ -1.69
CMSS1-204ENST00000479555 CCDC93Q567U6 631 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 HSP90AB4PQ58FF6 505 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 RUSC1-AS1Q66K80 236 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 FAM43BQ6ZT52 329 aaPredicted RBP4.47□□□□□ -1.69
CMSS1-204ENST00000479555 CHST15Q7LFX5 561 aaPredicted RBP4.47□□□□□ -1.69
CMSS1-204ENST00000479555 ZNF551Q7Z340 670 aaPredicted RBP4.47□□□□□ -1.69
CMSS1-204ENST00000479555 ANKRD23Q86SG2 305 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 LUZP1Q86V48 1076 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 CCDC146Q8IYE0 955 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 AOPEPQ8N6M6 819 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 FANCBQ8NB91 859 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 CTCFLQ8NI51 663 aaPredicted RBP4.47□□□□□ -1.69
CMSS1-204ENST00000479555 DTNBP1Q96EV8 351 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 THUMPD2Q9BTF0 503 aaKnown RBP4.47□□□□□ -1.69
CMSS1-204ENST00000479555 ALG8Q9BVK2 526 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 TMEM60Q9H2L4 133 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 WDCPQ9H6R7 721 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 PDGFCQ9NRA1 345 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 CNNM1Q9NRU3 951 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 ITGB1BP2Q9UKP3 347 aa4.47□□□□□ -1.69
CMSS1-204ENST00000479555 PLB1Q6P1J6 1458 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms