RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 KCNJ12Q14500 433 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 PPP2R5DQ14738 602 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 ZNF528Q3MIS6 628 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 VWA3BQ502W6 1294 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 PKDCCQ504Y2 493 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 CCDC183Q5T5S1 534 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 KLHDC10Q6PID8 442 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 ZC3H14Q6PJT7 736 aaKnown RBP25.24■■□□□ 1.63
CPNE1-223ENST00000475146 BBS7Q8IWZ6 715 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 ADGRG2Q8IZP9 1017 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 SPEM1Q8N4L4 309 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 SECISBP2LQ93073 1101 aaKnown RBP25.24■■□□□ 1.63
CPNE1-223ENST00000475146 WBP2Q969T9 261 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 CDK5RAP1Q96SZ6 601 aaKnown RBP25.24■■□□□ 1.63
CPNE1-223ENST00000475146 NDST4Q9H3R1 872 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 FBRSL1Q9HCM7 1045 aaKnown RBP25.24■■□□□ 1.63
CPNE1-223ENST00000475146 SAMSN1Q9NSI8 373 aaKnown RBP25.24■■□□□ 1.63
CPNE1-223ENST00000475146 APEX2Q9UBZ4 518 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 RASAL2Q9UJF2 1139 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 LSM7Q9UK45 103 aaKnown RBP25.24■■□□□ 1.63
CPNE1-223ENST00000475146 NFE2L3Q9Y4A8 694 aa25.24■■□□□ 1.63
CPNE1-223ENST00000475146 PROB1E7EW31 1015 aa25.23■■□□□ 1.63
CPNE1-223ENST00000475146 DRD1P21728 446 aa25.23■■□□□ 1.63
CPNE1-223ENST00000475146 PON1P27169 355 aa25.23■■□□□ 1.63
CPNE1-223ENST00000475146 CXCL12P48061 93 aa25.23■■□□□ 1.63
CPNE1-223ENST00000475146 RGS7P49802 495 aa25.23■■□□□ 1.63
CPNE1-223ENST00000475146 SATB1Q01826 763 aa25.23■■□□□ 1.63
CPNE1-223ENST00000475146 ARHGAP44Q17R89 818 aa25.23■■□□□ 1.63
CPNE1-223ENST00000475146 RSRC2Q7L4I2 434 aaKnown RBP25.23■■□□□ 1.63
CPNE1-223ENST00000475146 MIB1Q86YT6 1006 aa25.23■■□□□ 1.63
CPNE1-223ENST00000475146 NDRG1Q92597 394 aaKnown RBP25.23■■□□□ 1.63
CPNE1-223ENST00000475146 NKD2Q969F2 451 aaPredicted RBP25.23■■□□□ 1.63
CPNE1-223ENST00000475146 OTUB2Q96DC9 234 aa25.23■■□□□ 1.63
CPNE1-223ENST00000475146 CNTN6Q9UQ52 1028 aa25.23■■□□□ 1.63
CPNE1-223ENST00000475146 LCP1P13796 627 aa25.22■■□□□ 1.63
CPNE1-223ENST00000475146 USP8P40818 1118 aa25.22■■□□□ 1.63
CPNE1-223ENST00000475146 MAMSTRQ6ZN01 415 aa25.22■■□□□ 1.63
CPNE1-223ENST00000475146 ENOX1Q8TC92 643 aaKnown RBP25.22■■□□□ 1.63
CPNE1-223ENST00000475146 KCTD13Q8WZ19 329 aa25.22■■□□□ 1.63
CPNE1-223ENST00000475146 ANO10Q9NW15 660 aa25.22■■□□□ 1.63
CPNE1-223ENST00000475146 GFRA3O60609 400 aa25.21■■□□□ 1.63
CPNE1-223ENST00000475146 ADH5P11766 374 aa25.21■■□□□ 1.63
CPNE1-223ENST00000475146 EFEMP1Q12805 493 aa25.21■■□□□ 1.63
CPNE1-223ENST00000475146 STX1AQ16623 288 aa25.21■■□□□ 1.63
CPNE1-223ENST00000475146 MIIPQ5JXC2 388 aa25.21■■□□□ 1.63
CPNE1-223ENST00000475146 LY6G5CQ5SRR4 150 aa25.21■■□□□ 1.63
CPNE1-223ENST00000475146 PM20D1Q6GTS8 502 aa25.21■■□□□ 1.63
CPNE1-223ENST00000475146 RHBDF2Q6PJF5 856 aa25.21■■□□□ 1.63
CPNE1-223ENST00000475146 ZNF276Q8N554 614 aa25.21■■□□□ 1.63
CPNE1-223ENST00000475146 SLC35F5Q8WV83 523 aa25.21■■□□□ 1.63
CPNE1-223ENST00000475146 PIK3R2O00459 728 aa25.2■■□□□ 1.62
CPNE1-223ENST00000475146 THAP12O43422 761 aa25.2■■□□□ 1.62
CPNE1-223ENST00000475146 RNF40O75150 1001 aa25.2■■□□□ 1.62
CPNE1-223ENST00000475146 LETM1O95202 739 aaPredicted RBP25.2■■□□□ 1.62
CPNE1-223ENST00000475146 EEF1GP26641 437 aaKnown RBP25.2■■□□□ 1.62
CPNE1-223ENST00000475146 OPRD1P41143 372 aa25.2■■□□□ 1.62
CPNE1-223ENST00000475146 GAB4Q2WGN9 574 aa25.2■■□□□ 1.62
CPNE1-223ENST00000475146 TCP11X2Q5H9J9 407 aa25.2■■□□□ 1.62
CPNE1-223ENST00000475146 BTBD8Q5XKL5 378 aa25.2■■□□□ 1.62
CPNE1-223ENST00000475146 PMF1Q6P1K2 205 aa25.2■■□□□ 1.62
CPNE1-223ENST00000475146 HTR3DQ70Z44 454 aa25.2■■□□□ 1.62
CPNE1-223ENST00000475146 CNGB3Q9NQW8 809 aa25.2■■□□□ 1.62
CPNE1-223ENST00000475146 TAB2Q9NYJ8 693 aa25.2■■□□□ 1.62
CPNE1-223ENST00000475146 STRIP2Q9ULQ0 834 aa25.2■■□□□ 1.62
CPNE1-223ENST00000475146 MED7O43513 233 aa25.19■■□□□ 1.62
CPNE1-223ENST00000475146 GNA15P30679 374 aa25.19■■□□□ 1.62
CPNE1-223ENST00000475146 GAD2Q05329 585 aa25.19■■□□□ 1.62
CPNE1-223ENST00000475146 FBXO43Q4G163 708 aa25.19■■□□□ 1.62
CPNE1-223ENST00000475146 PKN3Q6P5Z2 889 aa25.19■■□□□ 1.62
CPNE1-223ENST00000475146 C11orf57Q6ZUT1 292 aaPredicted RBP25.19■■□□□ 1.62
CPNE1-223ENST00000475146 BHLHA9Q7RTU4 235 aa25.19■■□□□ 1.62
CPNE1-223ENST00000475146 ATRIPQ8WXE1 791 aa25.19■■□□□ 1.62
CPNE1-223ENST00000475146 SIX2Q9NPC8 291 aa25.19■■□□□ 1.62
CPNE1-223ENST00000475146 ZSCAN32Q9NX65 697 aa25.19■■□□□ 1.62
CPNE1-223ENST00000475146 MARCH2Q9P0N8 246 aa25.19■■□□□ 1.62
CPNE1-223ENST00000475146 BECN2A8MW95 431 aa25.18■■□□□ 1.62
CPNE1-223ENST00000475146 GREM1O60565 184 aa25.18■■□□□ 1.62
CPNE1-223ENST00000475146 STC2O76061 302 aa25.18■■□□□ 1.62
CPNE1-223ENST00000475146 HMBSP08397 361 aa25.18■■□□□ 1.62
CPNE1-223ENST00000475146 ANO4Q32M45 955 aa25.18■■□□□ 1.62
CPNE1-223ENST00000475146 ASCL5Q7RTU5 278 aa25.18■■□□□ 1.62
CPNE1-223ENST00000475146 RNF139Q8WU17 664 aa25.18■■□□□ 1.62
CPNE1-223ENST00000475146 SHC3Q92529 594 aa25.18■■□□□ 1.62
CPNE1-223ENST00000475146 EZH1Q92800 747 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-223ENST00000475146 ACP6Q9NPH0 428 aa25.18■■□□□ 1.62
CPNE1-223ENST00000475146 SPHK2Q9NRA0 654 aa25.18■■□□□ 1.62
CPNE1-223ENST00000475146 C2orf42Q9NWW7 574 aa25.18■■□□□ 1.62
CPNE1-223ENST00000475146 DNAJC12Q9UKB3 198 aa25.18■■□□□ 1.62
CPNE1-223ENST00000475146 AJAP1Q9UKB5 411 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-223ENST00000475146 PCDHGA2Q9Y5H1 932 aa25.18■■□□□ 1.62
CPNE1-223ENST00000475146 SLC12A8A0AV02 714 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 PRR23AA6NEV1 266 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 YJEFN3A6XGL0 299 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 E7ENQ6 273 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 ATG13O75143 517 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 SLC6A11P48066 632 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 DAOAP59103 153 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 COG7P83436 770 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 BSPRYQ5W0U4 402 aa25.17■■□□□ 1.62
CPNE1-223ENST00000475146 DENND1BQ6P3S1 775 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms