RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 HMGB4Q8WW32 186 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 HEXIM2Q96MH2 286 aaKnown RBP14.02□□□□□ -0.17
CPSF4-210ENST00000469897 IMPG2Q9BZV3 1241 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 CYP3A43Q9HB55 503 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 NMUR1Q9HB89 426 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 GDPD2Q9HCC8 539 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 BCCIPQ9P287 314 aaKnown RBP eCLIP14.02□□□□□ -0.17
CPSF4-210ENST00000469897 CEP250Q9BV73 2442 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 TCHHQ07283 1943 aa14.02□□□□□ -0.17
CPSF4-210ENST00000469897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 A0A1W2PQ27 194 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 A0A1W2PQ64 194 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 A0A1W2PQD8 194 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 A0A1W2PQH9 124 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 C4orf47A7E2U8 309 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 PATE3B3GLJ2 98 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 KHNYNO15037 678 aaKnown RBP14.01□□□□□ -0.17
CPSF4-210ENST00000469897 MDM4O15151 490 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 CYP26A1O43174 497 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 CILPO75339 1184 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 RARGP13631 454 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 TRIM21P19474 475 aaKnown RBP14.01□□□□□ -0.17
CPSF4-210ENST00000469897 P2RY2P41231 377 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 INCA1Q0VD86 236 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 C10orf76Q5T2E6 689 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 PPP1R26Q5T8A7 1209 aaPredicted RBP14.01□□□□□ -0.17
CPSF4-210ENST00000469897 TPGS1Q6ZTW0 290 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 NUDT18Q6ZVK8 323 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 TMEFF1Q8IYR6 380 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 ZNF513Q8N8E2 541 aaPredicted RBP14.01□□□□□ -0.17
CPSF4-210ENST00000469897 SEMA4DQ92854 862 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 LSM14BQ9BX40 385 aaKnown RBP14.01□□□□□ -0.17
CPSF4-210ENST00000469897 NIF3L1Q9GZT8 377 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 SCAND2PQ9GZW5 306 aaPredicted RBP14.01□□□□□ -0.17
CPSF4-210ENST00000469897 CYLDQ9NQC7 956 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 HCN2Q9UL51 889 aa14.01□□□□□ -0.17
CPSF4-210ENST00000469897 TCRBV21S2A2A0A5A6 115 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 NEDD8-MDP1E9PL57 170 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 KCNK5O95279 499 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 PLA2G4AP47712 749 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 KIF11P52732 1056 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 IRX4P78413 519 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 PREPLQ4J6C6 727 aaPredicted RBP14□□□□□ -0.17
CPSF4-210ENST00000469897 KRT39Q6A163 491 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 ARMCX6Q7L4S7 300 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 LPCAT2Q7L5N7 544 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 SCD5Q86SK9 330 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 MIB1Q86YT6 1006 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 SMYD4Q8IYR2 804 aaPredicted RBP14□□□□□ -0.17
CPSF4-210ENST00000469897 CCDC150Q8NCX0 1101 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 PIGKQ92643 395 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 ERLEC1Q96DZ1 483 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 DUSP9Q99956 384 aaKnown RBP14□□□□□ -0.17
CPSF4-210ENST00000469897 EDEM2Q9BV94 578 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 BBS2Q9BXC9 721 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 DUSP16Q9BY84 665 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 TMEM8AQ9HCN3 771 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14□□□□□ -0.17
CPSF4-210ENST00000469897 MBD1Q9UIS9 605 aaPredicted RBP14□□□□□ -0.17
CPSF4-210ENST00000469897 NAGPAQ9UK23 515 aa14□□□□□ -0.17
CPSF4-210ENST00000469897 NCOR2Q9Y618 2525 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 TYRP14679 529 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 GTF2H1P32780 548 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 PTGER3P43115 390 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 ENPEPQ07075 957 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 MAP7D1Q3KQU3 841 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 C10orf120Q5SQS8 335 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 GRAMD4Q6IC98 578 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 TOGARAM2Q6ZUX3 1019 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 CYP2U1Q7Z449 544 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 DEFB119Q8N690 84 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 TERB1Q8NA31 727 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 KCNV2Q8TDN2 545 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 TATDN2Q93075 761 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 XPO6Q96QU8 1125 aaKnown RBP13.99□□□□□ -0.17
CPSF4-210ENST00000469897 ACOX2Q99424 681 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 TMEM74BQ9NUR3 256 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 DNAJC17Q9NVM6 304 aaKnown RBP13.99□□□□□ -0.17
CPSF4-210ENST00000469897 RAB20Q9NX57 234 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 WDR35Q9P2L0 1181 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 DNMT3LQ9UJW3 386 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 LSM7Q9UK45 103 aaKnown RBP13.99□□□□□ -0.17
CPSF4-210ENST00000469897 STARD13Q9Y3M8 1113 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 PCDHA5Q9Y5H7 936 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 ATP6V1DQ9Y5K8 247 aa13.99□□□□□ -0.17
CPSF4-210ENST00000469897 KIF26AQ9ULI4 1882 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-210ENST00000469897 LNP1A1A4G5 178 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 PRRT4C9JH25 899 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 CDX4O14627 284 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-210ENST00000469897 KRT37O76014 449 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 CISD3P0C7P0 127 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 GABRG2P18507 467 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 NTSR1P30989 418 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 MCCD1P59942 119 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-210ENST00000469897 GOLGA8FQ08AF8 430 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 GOLGA8DPQ0D2H9 430 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 BYSLQ13895 437 aaKnown RBP13.98□□□□□ -0.17
CPSF4-210ENST00000469897 ZCWPW2Q504Y3 356 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 EGFLAMQ63HQ2 1017 aa13.98□□□□□ -0.17
CPSF4-210ENST00000469897 SDE2Q6IQ49 451 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms