RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 RPGRIP1Q96KN7 1286 aa13.33□□□□□ -0.28
TRAF4-208ENST00000469529 TLR9Q9NR96 1032 aa13.33□□□□□ -0.28
TRAF4-208ENST00000469529 DDX56Q9NY93 547 aaKnown RBP13.33□□□□□ -0.28
TRAF4-208ENST00000469529 STAP1Q9ULZ2 295 aa13.33□□□□□ -0.28
TRAF4-208ENST00000469529 VWA8A3KMH1 1905 aa13.33□□□□□ -0.28
TRAF4-208ENST00000469529 PTPRSQ13332 1948 aa13.33□□□□□ -0.28
TRAF4-208ENST00000469529 SLC38A8A6NNN8 435 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 ZNF487B1APH4 448 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 PIK3R2O00459 728 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 KCNK3O14649 394 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 NCK2O43639 380 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 ARHGEF15O94989 841 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 ZRANB2O95218 330 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRAF4-208ENST00000469529 TRUB2O95900 331 aaKnown RBP13.32□□□□□ -0.28
TRAF4-208ENST00000469529 IGLV3-25P01717 112 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 POU2F2P09086 479 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 CSH1P0DML2 217 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 CSH2P0DML3 217 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 ATF6P18850 670 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 DNAJB1P25685 340 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 MIPP30301 263 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 ELF1P32519 619 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 PTPN7P35236 360 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 ALDH1A3P47895 512 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 AIF1P55008 147 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 TAS2R40P59535 323 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 RNASE9P60153 205 aaKnown RBP13.32□□□□□ -0.28
TRAF4-208ENST00000469529 SLC25A11Q02978 314 aaKnown RBP13.32□□□□□ -0.28
TRAF4-208ENST00000469529 TAZQ16635 292 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 PPP2R2DQ66LE6 453 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 CCDC149Q6ZUS6 474 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 PDZD8Q8NEN9 1154 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 FAM71BQ8TC56 605 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 TEKT4Q8WW24 435 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 ALG3Q92685 438 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 KRT35Q92764 455 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 GAS2L1Q99501 681 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-208ENST00000469529 TCF25Q9BQ70 676 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 PLEKHA4Q9H4M7 779 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 PRDM12Q9H4Q4 367 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 ALG13Q9NP73 1137 aaKnown RBP13.32□□□□□ -0.28
TRAF4-208ENST00000469529 FBXW11Q9UKB1 542 aa13.32□□□□□ -0.28
TRAF4-208ENST00000469529 FAM170AA1A519 330 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 TMEM110-MUSTN1A8MSY1 372 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 GRM6O15303 877 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 TGM5O43548 720 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 GRAP2O75791 330 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 HMGA1P17096 107 aaKnown RBP13.31□□□□□ -0.28
TRAF4-208ENST00000469529 TERF1P54274 439 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 HDAC4P56524 1084 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 YWHAGP61981 247 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRAF4-208ENST00000469529 DCAF6Q58WW2 860 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 SYPL2Q5VXT5 272 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 MSANTD2Q6P1R3 559 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 KLHDC10Q6PID8 442 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 HFE2Q6ZVN8 426 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 TTC9BQ8N6N2 239 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 CEP112Q8N8E3 955 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 MNS1Q8NEH6 495 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 COG1Q8WTW3 980 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 AUTS2Q8WXX7 1259 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 NDRG1Q92597 394 aaKnown RBP13.31□□□□□ -0.28
TRAF4-208ENST00000469529 FAM149B1Q96BN6 582 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 CFAP57Q96MR6 1250 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 CDK5RAP1Q96SZ6 601 aaKnown RBP13.31□□□□□ -0.28
TRAF4-208ENST00000469529 NAP1L3Q99457 506 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-208ENST00000469529 SEPT5Q99719 369 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-208ENST00000469529 PRDM16Q9HAZ2 1276 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 CYP4F11Q9HBI6 524 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 DPP7Q9UHL4 492 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 USP18Q9UMW8 372 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 PACSIN2Q9UNF0 486 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-208ENST00000469529 MYO9BQ13459 2157 aa13.31□□□□□ -0.28
TRAF4-208ENST00000469529 COL4A4P53420 1690 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-208ENST00000469529 COL6A3P12111 3177 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-208ENST00000469529 SOBPA7XYQ1 873 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 CAPN9O14815 690 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 MDM4O15151 490 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 LPXNO60711 386 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 PYGMP11217 842 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 HOXA9P31269 272 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 GBP1P32455 592 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 PAFAH1B1P43034 410 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 CXCR3P49682 368 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 GPR15P49685 360 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 TUBP50607 506 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 ARSEP51690 589 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 USP46P62068 366 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 CKAP4Q07065 602 aaKnown RBP13.3□□□□□ -0.28
TRAF4-208ENST00000469529 NNTQ13423 1086 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 GPM6BQ13491 265 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 DCAF12L1Q5VU92 463 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 BTBD8Q5XKL5 378 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 CYP4V2Q6ZWL3 525 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-208ENST00000469529 ITIH5Q86UX2 942 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 CPNE8Q86YQ8 564 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 KREMEN2Q8NCW0 462 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 FAM172AQ8WUF8 416 aa13.3□□□□□ -0.28
TRAF4-208ENST00000469529 PSMG2Q969U7 264 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms