RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 STEAP1Q9UHE8 339 aa4.24□□□□□ -1.73
TM9SF3-203ENST00000464654 VPS51Q9UID3 782 aa4.24□□□□□ -1.73
TM9SF3-203ENST00000464654 MID2Q9UJV3 735 aa4.24□□□□□ -1.73
TM9SF3-203ENST00000464654 RIMKLBQ9ULI2 386 aa4.24□□□□□ -1.73
TM9SF3-203ENST00000464654 COL15A1P39059 1388 aa4.24□□□□□ -1.73
TM9SF3-203ENST00000464654 FRMPD2Q68DX3 1309 aaPredicted RBP4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 LOC105371045A0A1W2PR82 267 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 RAB27BO00194 218 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 SNX2O60749 519 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 MAP4K4O95819 1239 aaPredicted RBP4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 FGBP02675 491 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 ATF7P17544 494 aaPredicted RBP4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 CARSP49589 748 aaKnown RBP4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 KRTAP10-9P60411 292 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 ANO7Q6IWH7 933 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 TMEM65Q6PI78 240 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 DCDC5Q6ZRR9 648 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 UNC13DQ70J99 1090 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 UBE2Q1Q7Z7E8 422 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 C12orf76Q8N812 135 aaPredicted RBP4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 MAFAQ8NHW3 353 aaPredicted RBP4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 CUL5Q93034 780 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 EDC3Q96F86 508 aaKnown RBP4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 HIC2Q96JB3 615 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 VPS50Q96JG6 964 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 FAM227BQ96M60 508 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 BRIP1Q9BX63 1249 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 NUP62CLQ9H1M0 184 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 OBP2AQ9NY56 170 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 ELOVL5Q9NYP7 299 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 KLHL13Q9P2N7 655 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 PI4KBQ9UBF8 816 aa4.23□□□□□ -1.73
TM9SF3-203ENST00000464654 AGPSO00116 658 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 MT-ND5P03915 603 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 ADRA1DP25100 572 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 RBL1P28749 1068 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 MCM5P33992 734 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 NR4A2P43354 598 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 COPAP53621 1224 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 GHRHRQ02643 423 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 SRSF1Q07955 248 aaKnown RBP eCLIP4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 STK3Q13188 491 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 KCNB1Q14721 858 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 C10orf25Q5T742 122 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 MANEALQ5VSG8 457 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 PPP4R4Q6NUP7 873 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 RANBP10Q6VN20 620 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 USP49Q70CQ1 688 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 C16orf52Q8NHV5 167 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 MBD3L2Q8NHZ7 208 aaPredicted RBP4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 TTC8Q8TAM2 541 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 OSR1Q8TAX0 266 aaPredicted RBP4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 MAP4K1Q92918 833 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 KAZALD1Q96I82 304 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 SNX22Q96L94 193 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 HS6ST2Q96MM7 605 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 HIST1H2AAQ96QV6 131 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 SELENOOQ9BVL4 669 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 LPAR3Q9UBY5 353 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 ITGB1BP2Q9UKP3 347 aa4.22□□□□□ -1.73
TM9SF3-203ENST00000464654 SPATA31A1Q5TZJ5 1347 aa4.21□□□□□ -1.73
TM9SF3-203ENST00000464654 CNOT3O75175 753 aaKnown RBP4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 ANXA2P07355 339 aaKnown RBP4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 EIF4A1P60842 406 aaKnown RBP4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 GPC5P78333 572 aa4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 HTRA4P83105 476 aaPredicted RBP4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 GALEQ14376 348 aa4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 Q4G0T1 1027 aa4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 KRT28Q7Z3Y7 464 aa4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 METTL25Q8N6Q8 603 aa4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 PHKBQ93100 1093 aa4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 TTC17Q96AE7 1141 aa4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 SIGLEC11Q96RL6 698 aa4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 SPRTNQ9H040 489 aaPredicted RBP4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 DDX21Q9NR30 783 aaKnown RBP eCLIP4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 TRNAU1APQ9NX07 287 aaKnown RBP4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 SEMA5BQ9P283 1151 aa4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 ZNF212Q9UDV6 495 aa4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 FZD4Q9ULV1 537 aa4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 SLC27A6Q9Y2P4 619 aa4.21□□□□□ -1.74
TM9SF3-203ENST00000464654 KRTAP29-1A8MX34 341 aaPredicted RBP4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 SOCS2O14508 198 aa4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 TMEM191BP0C7N4 346 aa4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 THBS4P35443 961 aa4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 CCT4P50991 539 aaKnown RBP4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 ITGA8P53708 1063 aa4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 TXNL4AP83876 142 aaKnown RBP4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 HSF1Q00613 529 aa4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 CFHR1Q03591 330 aa4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 TMTC4Q5T4D3 741 aa4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 RNF44Q7L0R7 432 aa4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 NANOGP1Q8N7R0 232 aa4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 ZBTB9Q96C00 473 aa4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 CINPQ9BW66 212 aaPredicted RBP4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 G3BP2Q9UN86 482 aaKnown RBP4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 HPSEQ9Y251 543 aa4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 AFG3L2Q9Y4W6 797 aa4.2□□□□□ -1.74
TM9SF3-203ENST00000464654 CLCA1A8K7I4 914 aa4.19□□□□□ -1.74
TM9SF3-203ENST00000464654 CLIC1O00299 241 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms