RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 RALGAPA1Q6GYQ0 2036 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 GNA14O95837 355 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 PLA2G4AP47712 749 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 MESP2Q0VG99 397 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 DMC1Q14565 340 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 PIGZQ86VD9 579 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 C12orf40Q86WS4 652 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 TRIM59Q8IWR1 403 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 GAB3Q8WWW8 586 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 SPHK2Q9NRA0 654 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 POLR3BQ9NW08 1133 aaPredicted RBP20.41■□□□□ 0.86
USP40-207ENST00000450940 KIAA1468Q9P260 1216 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 EBF1Q9UH73 591 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 DNMT3LQ9UJW3 386 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 GMEB2Q9UKD1 530 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 CTNND2Q9UQB3 1225 aa20.41■□□□□ 0.86
USP40-207ENST00000450940 MYO18AQ92614 2054 aaKnown RBP20.41■□□□□ 0.86
USP40-207ENST00000450940 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.4■□□□□ 0.86
USP40-207ENST00000450940 KAT7O95251 611 aa20.4■□□□□ 0.86
USP40-207ENST00000450940 RETP07949 1114 aa20.4■□□□□ 0.86
USP40-207ENST00000450940 VDRP11473 427 aa20.4■□□□□ 0.86
USP40-207ENST00000450940 ID4P47928 161 aa20.4■□□□□ 0.86
USP40-207ENST00000450940 PXNP49023 591 aaPredicted RBP20.4■□□□□ 0.86
USP40-207ENST00000450940 MRPS21P82921 87 aaKnown RBP20.4■□□□□ 0.86
USP40-207ENST00000450940 PAK1Q13153 545 aa20.4■□□□□ 0.86
USP40-207ENST00000450940 SGO2Q562F6 1265 aa20.4■□□□□ 0.86
USP40-207ENST00000450940 PM20D1Q6GTS8 502 aa20.4■□□□□ 0.86
USP40-207ENST00000450940 PRR23BQ6ZRT6 265 aa20.4■□□□□ 0.86
USP40-207ENST00000450940 TADA2BQ86TJ2 420 aa20.4■□□□□ 0.86
USP40-207ENST00000450940 TMEM25Q86YD3 366 aa20.4■□□□□ 0.86
USP40-207ENST00000450940 NT5C1BQ96P26 610 aa20.4■□□□□ 0.86
USP40-207ENST00000450940 CDK5RAP1Q96SZ6 601 aaKnown RBP20.4■□□□□ 0.86
USP40-207ENST00000450940 NAGPAQ9UK23 515 aa20.4■□□□□ 0.86
USP40-207ENST00000450940 ANTXRLA6NF34 631 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 XPO1O14980 1071 aaKnown RBP20.39■□□□□ 0.85
USP40-207ENST00000450940 LRP3O75074 770 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 APODP05090 189 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 PAEPP09466 180 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 IRF1P10914 325 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 RALAP11233 206 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 GRIA2P42262 883 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 TNFRSF4P43489 277 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 BCAT1P54687 386 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 SLC8A3P57103 927 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 GOLGA8FQ08AF8 430 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 GOLGA8DPQ0D2H9 430 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 CETN1Q12798 172 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 LRMPQ12912 555 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 HSF5Q4G112 596 aaPredicted RBP20.39■□□□□ 0.85
USP40-207ENST00000450940 C10orf120Q5SQS8 335 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 Q6ZNB5 142 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 ARHGAP18Q8N392 663 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 NUDT5Q9UKK9 219 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 TSPAN16Q9UKR8 245 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 MMP17Q9ULZ9 603 aa20.39■□□□□ 0.85
USP40-207ENST00000450940 O00370 1275 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 APBB3O95704 486 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 KIR2DL1P43626 348 aaPredicted RBP20.38■□□□□ 0.85
USP40-207ENST00000450940 STX17P56962 302 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 PDE4CQ08493 712 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 KCNH2Q12809 1159 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 LPAL2Q16609 132 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 GOLGA7BQ2TAP0 167 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 PKDCCQ504Y2 493 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 C2orf27AQ580R0 203 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 SFTPA1Q8IWL2 248 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 EHBP1Q8NDI1 1231 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 RMDN1Q96DB5 314 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 HHIPQ96QV1 700 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 SRRTQ9BXP5 876 aaKnown RBP20.38■□□□□ 0.85
USP40-207ENST00000450940 PARD6AQ9NPB6 346 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 ARHGEF4Q9NR80 690 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 MARK1Q9P0L2 795 aa20.38■□□□□ 0.85
USP40-207ENST00000450940 LSM7Q9UK45 103 aaKnown RBP20.38■□□□□ 0.85
USP40-207ENST00000450940 CACNA1AO00555 2505 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 TULP2O00295 520 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 MDM4O15151 490 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 AXIN1O15169 862 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 TULP3O75386 442 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 RPP40O75818 363 aaKnown RBP20.37■□□□□ 0.85
USP40-207ENST00000450940 STC2O76061 302 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 ZBED1O96006 694 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 TKTL1P51854 596 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 GCNT1Q02742 428 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 BST2Q10589 180 aaKnown RBP20.37■□□□□ 0.85
USP40-207ENST00000450940 PREPLQ4J6C6 727 aaPredicted RBP20.37■□□□□ 0.85
USP40-207ENST00000450940 BTBD8Q5XKL5 378 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 LCLAT1Q6UWP7 414 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 CEP68Q76N32 757 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 BHLHA9Q7RTU4 235 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 FAM160A2Q8N612 972 aaPredicted RBP20.37■□□□□ 0.85
USP40-207ENST00000450940 KCNV2Q8TDN2 545 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 KCTD13Q8WZ19 329 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 LOXL4Q96JB6 756 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 ZC3H10Q96K80 434 aaKnown RBP20.37■□□□□ 0.85
USP40-207ENST00000450940 DLL3Q9NYJ7 618 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 DEC1Q9P2X7 70 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 HESX1Q9UBX0 185 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 RWDD2AQ9UIY3 292 aa20.37■□□□□ 0.85
USP40-207ENST00000450940 RNF225M0QZC1 329 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms