RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 SPOCD1Q6ZMY3 1216 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 TTC9BQ8N6N2 239 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 ZNF461Q8TAF7 563 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 PEBP4Q96S96 227 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 SEPT5Q99719 369 aaPredicted RBP21.09■□□□□ 0.97
VRK2-207ENST00000440705 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.09■□□□□ 0.97
VRK2-207ENST00000440705 COMMD8Q9NX08 183 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 HSFX1Q9UBD0 423 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 AFF4Q9UHB7 1163 aaKnown RBP21.09■□□□□ 0.97
VRK2-207ENST00000440705 SCML2Q9UQR0 700 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 SSX2IPQ9Y2D8 614 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 EFR3BQ9Y2G0 817 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 TARSL2A2RTX5 802 aaKnown RBP21.09■□□□□ 0.97
VRK2-207ENST00000440705 M0QYT0 321 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 MDM4O15151 490 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 RTN3O95197 1032 aaPredicted RBP21.09■□□□□ 0.97
VRK2-207ENST00000440705 VNN2O95498 520 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 LINC00271P0C7V0 271 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 KDELR1P24390 212 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 CREMQ03060 361 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 RAB6CQ53S08 254 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 CYP4V2Q6ZWL3 525 aaPredicted RBP21.09■□□□□ 0.97
VRK2-207ENST00000440705 BNIPLQ7Z465 357 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 MAP7D3Q8IWC1 876 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 KLHL7Q8IXQ5 586 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 HSPH1Q92598 858 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 ACSF2Q96CM8 615 aaPredicted RBP21.09■□□□□ 0.97
VRK2-207ENST00000440705 LRRC1Q9BTT6 524 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 RAB6CQ9H0N0 254 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 SLITRK6Q9H5Y7 841 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 ANKZF1Q9H8Y5 726 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 IL37Q9NZH6 218 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 NR2E1Q9Y466 385 aa21.09■□□□□ 0.97
VRK2-207ENST00000440705 C3orf70A6NLC5 250 aaPredicted RBP21.08■□□□□ 0.96
VRK2-207ENST00000440705 ABLIM3O94929 683 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 TJP3O95049 919 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 RDXP35241 583 aaKnown RBP21.08■□□□□ 0.96
VRK2-207ENST00000440705 CDKN2BP42772 138 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 GPR15P49685 360 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 YWHAGP61981 247 aaKnown RBP eCLIP21.08■□□□□ 0.96
VRK2-207ENST00000440705 IFRD2Q12894 506 aaPredicted RBP21.08■□□□□ 0.96
VRK2-207ENST00000440705 PDK2Q15119 407 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 ERMARDQ5T6L9 678 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 SDHAF4Q5VUM1 108 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 DENND5BQ6ZUT9 1274 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 MON1AQ86VX9 555 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 ARHGAP18Q8N392 663 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 CCDC26Q8TAB7 109 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 PGAP3Q96FM1 320 aaPredicted RBP21.08■□□□□ 0.96
VRK2-207ENST00000440705 HEMGNQ9BXL5 484 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 ADAM33Q9BZ11 813 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 CRISPLD1Q9H336 500 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 HOMER3Q9NSC5 361 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 ABCC13Q9NSE7 274 aa21.08■□□□□ 0.96
VRK2-207ENST00000440705 TCRBV7S2A1N4TA0A589 114 aa21.07■□□□□ 0.96
VRK2-207ENST00000440705 F9P00740 461 aa21.07■□□□□ 0.96
VRK2-207ENST00000440705 DEUP1Q05D60 604 aa21.07■□□□□ 0.96
VRK2-207ENST00000440705 KLF1Q13351 362 aaPredicted RBP21.07■□□□□ 0.96
VRK2-207ENST00000440705 LLGL1Q15334 1064 aa21.07■□□□□ 0.96
VRK2-207ENST00000440705 CYP1B1Q16678 543 aa21.07■□□□□ 0.96
VRK2-207ENST00000440705 RASIP1Q5U651 963 aa21.07■□□□□ 0.96
VRK2-207ENST00000440705 PRELID2Q8N945 189 aa21.07■□□□□ 0.96
VRK2-207ENST00000440705 SLC7A14Q8TBB6 771 aa21.07■□□□□ 0.96
VRK2-207ENST00000440705 DDX47Q9H0S4 455 aaKnown RBP21.07■□□□□ 0.96
VRK2-207ENST00000440705 EPC1Q9H2F5 836 aa21.07■□□□□ 0.96
VRK2-207ENST00000440705 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.07■□□□□ 0.96
VRK2-207ENST00000440705 FNIP2Q9P278 1114 aa21.07■□□□□ 0.96
VRK2-207ENST00000440705 PHF2O75151 1096 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 ATF2P15336 505 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 YWHAQP27348 245 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 CHRNA3P32297 505 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 RAB33AQ14088 237 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 SIX1Q15475 284 aaPredicted RBP21.06■□□□□ 0.96
VRK2-207ENST00000440705 TAZQ16635 292 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 BTBD8Q5XKL5 378 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 MAATS1Q7Z4T9 603 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 PSTKQ8IV42 348 aaKnown RBP21.06■□□□□ 0.96
VRK2-207ENST00000440705 ZDHHC14Q8IZN3 488 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 KLHL23Q8NBE8 558 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 EDEM1Q92611 657 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 MAGOHBQ96A72 148 aaKnown RBP21.06■□□□□ 0.96
VRK2-207ENST00000440705 RUNDC3BQ96NL0 473 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 PARD6BQ9BYG5 372 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.06■□□□□ 0.96
VRK2-207ENST00000440705 MAFFQ9ULX9 164 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 RWDD3Q9Y3V2 267 aa21.06■□□□□ 0.96
VRK2-207ENST00000440705 hCG_1818297A0A087WSY0 165 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 FAM92AA1XBS5 289 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 SOAT2O75908 522 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 CTSAP10619 480 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 MCM3P25205 808 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 CDH6P55285 790 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 NME3Q13232 169 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 KRT81Q14533 505 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 OTUD1Q5VV17 481 aaPredicted RBP21.05■□□□□ 0.96
VRK2-207ENST00000440705 ANKS1BQ7Z6G8 1248 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 VSIG1Q86XK7 387 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 RUBCNQ92622 972 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 ABHD8Q96I13 439 aa21.05■□□□□ 0.96
VRK2-207ENST00000440705 SNRNP25Q9BV90 132 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms